RNA–Protein interactions for RNA: ENST00000273317.4

LIMD1-201, Transcript of LIM domains containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LIMD1, Length 11,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-201ENST00000273317 MEF2BQ02080 365 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-201ENST00000273317 MRGPRFQ96AM1 343 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 KCNMB1Q16558 191 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 TMEM30BQ3MIR4 351 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 HARBI1Q96MB7 349 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 IGHV5-51A0A0C4DH38 117 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 H3BMH7 237 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 HPRT1P00492 218 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 EPHA8P29322 1005 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-201ENST00000273317 HYAL1Q12794 435 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 VN1R4Q7Z5H5 301 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 EID2BQ96D98 161 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 GNRHR2Q96P88 292 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 MRPS18AQ9NVS2 196 aaKnown RBP6.98□□□□□ -1.29
LIMD1-201ENST00000273317 PAM16Q9Y3D7 125 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A10PA6NDY2 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A18PA6NE21 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A16PA6NEW6 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A20PA6NIJ5 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A8PA6NJQ4 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A7PA6NKC0 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A22PA8MWA6 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A12PA8MX19 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A5PA8MXJ8 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A23PA8MXZ1 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 SNURFLB1AK76 121 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 LDLRAD4O15165 306 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A15PP0C7V4 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A13PP0C7W8 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A14PP0C7W9 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A24PP0C7X0 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 NCMAPQ5T1S8 102 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 GPR35Q9HC97 309 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 BRCA1P38398 1863 aaKnown RBP6.98□□□□□ -1.29
LIMD1-201ENST00000273317 C3orf80F5H4A9 247 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 PRKNO60260 465 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-201ENST00000273317 MGPP08493 103 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 RAB9AP51151 201 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 GAMTQ14353 236 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 ZNF519Q8TB69 540 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 WNT16Q9UBV4 365 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 NUDT3O95989 172 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 ZNF735P0CB33 412 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 DYNLRB2Q8TF09 96 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 MIEN1Q9BRT3 115 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 TNKS1BP1Q9C0C2 1729 aaKnown RBP6.98□□□□□ -1.29
LIMD1-201ENST00000273317 CXCL3P19876 107 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 C8orf82Q6P1X6 216 aaPredicted RBP6.98□□□□□ -1.29
LIMD1-201ENST00000273317 TMEM45BQ96B21 275 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 TNFRSF19Q9NS68 423 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 HSF4Q9ULV5 492 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 TCRBV16S1A1N1A0A5B0 115 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 SPATA45Q537H7 98 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 MRPL24Q96A35 216 aaKnown RBP6.98□□□□□ -1.29
LIMD1-201ENST00000273317 METTL26Q96S19 204 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 PLA2G3Q9NZ20 509 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 MED12LQ86YW9 2145 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 FAM90A26D6RGX4 464 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 LYZL6O75951 148 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 C19orf54Q5BKX5 351 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 ST6GALNAC3Q8NDV1 305 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 GPA33Q99795 319 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 ABHD14AQ9BUJ0 271 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 TMEM222Q9H0R3 208 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 CLN8Q9UBY8 286 aa6.98□□□□□ -1.29
LIMD1-201ENST00000273317 PAGE4O60829 102 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 MMP16P51512 607 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 NXPH1P58417 271 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 MIXL1Q9H2W2 232 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 TMEM189A5PLL7 270 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 DHRS7CA6NNS2 312 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 TMPRSS2O15393 492 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 IFI6P09912 130 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 RGP1Q92546 391 aaPredicted RBP6.97□□□□□ -1.29
LIMD1-201ENST00000273317 MEX3AA1L020 520 aaKnown RBP6.97□□□□□ -1.29
LIMD1-201ENST00000273317 TWIST1Q15672 202 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 TEX30Q5JUR7 227 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 GCSAMQ8N6F7 178 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 PNLIPP16233 465 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 ADAD2Q8NCV1 583 aaKnown RBP6.97□□□□□ -1.29
LIMD1-201ENST00000273317 VN1R17PQ8TDU5 208 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 CT55Q8WUE5 264 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 SCNM1Q9BWG6 230 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 RCC2Q9P258 522 aaKnown RBP6.97□□□□□ -1.29
LIMD1-201ENST00000273317 TUBD1Q9UJT1 453 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 DLL1O00548 723 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 SS18L1O75177 396 aaPredicted RBP6.97□□□□□ -1.29
LIMD1-201ENST00000273317 ADAMTS17Q8TE56 1095 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 TBX15Q96SF7 602 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 C19orf24Q9BVV8 132 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 CISD1Q9NZ45 108 aaKnown RBP6.97□□□□□ -1.29
LIMD1-201ENST00000273317 FLRT3Q9NZU0 649 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 OR2W5A6NFC9 320 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 HOXD4P09016 255 aaPredicted RBP6.97□□□□□ -1.29
LIMD1-201ENST00000273317 SCGB1A1P11684 91 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 PSG9Q00887 426 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 FAM209AQ5JX71 171 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 DNLZQ5SXM8 178 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 MOGAT3Q86VF5 341 aa6.97□□□□□ -1.29
LIMD1-201ENST00000273317 MRPL13Q9BYD1 178 aaKnown RBP6.97□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms