RNA–Protein interactions for RNA: ENST00000273064.10

CNOT9-201, Transcript of CCR4-NOT transcription complex subunit 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT9, Length 4,079 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT9-201ENST00000273064 GPR146Q96CH1 333 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 ARHGAP21Q5T5U3 1957 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 LOC102723996A0A087X1L8 192 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 FAM90A27PA6NNH2 459 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 MT-CO2P00403 227 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 IGHV3-48P01763 117 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 KLF3P57682 345 aaPredicted RBP12.48□□□□□ -0.41
CNOT9-201ENST00000273064 ZNRF1Q8ND25 227 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 KLF14Q8TD94 323 aaPredicted RBP12.48□□□□□ -0.41
CNOT9-201ENST00000273064 NDRG3Q9UGV2 375 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 ATPIF1Q9UII2 106 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 PPP5D1E7EU14 171 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 P2RY1P47900 373 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 RAB13P51153 203 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 RPP30P78346 268 aaKnown RBP12.48□□□□□ -0.41
CNOT9-201ENST00000273064 TNFAIP6P98066 277 aaPredicted RBP12.48□□□□□ -0.41
CNOT9-201ENST00000273064 COL10A1Q03692 680 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 SLC25A53Q5H9E4 307 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 EDARADDQ8WWZ3 215 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 RNF122Q9H9V4 155 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 PNRC2Q9NPJ4 139 aaKnown RBP12.48□□□□□ -0.41
CNOT9-201ENST00000273064 HSF4Q9ULV5 492 aa12.48□□□□□ -0.41
CNOT9-201ENST00000273064 SETD2Q9BYW2 2564 aaPredicted RBP12.48□□□□□ -0.41
CNOT9-201ENST00000273064 NAT2P11245 290 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 COX5AP20674 150 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 PRB3Q04118 309 aaPredicted RBP12.47□□□□□ -0.41
CNOT9-201ENST00000273064 TMEM187Q14656 261 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 GGNQ86UU5 652 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 NTNG2Q96CW9 530 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 RAB40CQ96S21 281 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 POMT1Q9Y6A1 747 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 V9GYS6 101 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 HBZP02008 142 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 ZNF385CQ66K41 422 aaPredicted RBP12.47□□□□□ -0.41
CNOT9-201ENST00000273064 NCR3LG1Q68D85 454 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 STUMQ69YW2 141 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 PRR27Q6MZM9 219 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 BMPERQ8N8U9 685 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 TPPP3Q9BW30 176 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 COMMD5Q9GZQ3 224 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 LDLRAD4O15165 306 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 CD200P41217 278 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 SULT1A1P50225 295 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 RAB5CP51148 216 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 RPL19P84098 196 aaKnown RBP12.47□□□□□ -0.41
CNOT9-201ENST00000273064 ACSM6Q6P461 480 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 Q8IYB0 196 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 RBMXL3Q8N7X1 1067 aaKnown RBP12.47□□□□□ -0.41
CNOT9-201ENST00000273064 LY6G6EA0A0G2JKS1 128 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 LOC390937A0A1W2PQ73 354 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 LRRC30A6NM36 301 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 CDK2AP1O14519 115 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 CDS2O95674 445 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 EGR1P18146 543 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 H3F3AP84243 136 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 TMEM41BQ5BJD5 291 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 C1orf87Q8N0U7 546 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 SAMD10Q9BYL1 202 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 ACTR3CQ9C0K3 210 aaPredicted RBP12.47□□□□□ -0.41
CNOT9-201ENST00000273064 U3KQA8 63 aa12.47□□□□□ -0.41
CNOT9-201ENST00000273064 TRGV10A0A0A0MS01 117 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 WBP1Q96G27 269 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 IGHV3-21A0A0B4J1V1 117 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 NTN3O00634 580 aaPredicted RBP12.46□□□□□ -0.41
CNOT9-201ENST00000273064 ZNF737O75373 536 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 SULT1A2P50226 295 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 OR10G4Q8NGN3 311 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 OR10G9Q8NGN4 311 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 OR10G7Q8NGN6 311 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 DTD1Q8TEA8 209 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 RNF166Q96A37 237 aaPredicted RBP12.46□□□□□ -0.41
CNOT9-201ENST00000273064 AQP10Q96PS8 301 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 Q9N2K0 584 aa12.46□□□□□ -0.41
CNOT9-201ENST00000273064 CCDC168Q8NDH2 2452 aa12.46□□□□□ -0.42
CNOT9-201ENST00000273064 MDFIC2A0A1B0GVS7 189 aa12.46□□□□□ -0.42
CNOT9-201ENST00000273064 H3BQ15 152 aa12.46□□□□□ -0.42
CNOT9-201ENST00000273064 CNIH1O95406 144 aa12.46□□□□□ -0.42
CNOT9-201ENST00000273064 CLDN14O95500 239 aa12.46□□□□□ -0.42
CNOT9-201ENST00000273064 SCGB1D1O95968 90 aa12.46□□□□□ -0.42
CNOT9-201ENST00000273064 LHX2P50458 406 aa12.46□□□□□ -0.42
CNOT9-201ENST00000273064 BHLHA15Q7RTS1 189 aaPredicted RBP12.46□□□□□ -0.42
CNOT9-201ENST00000273064 FGFRL1Q8N441 504 aa12.46□□□□□ -0.42
CNOT9-201ENST00000273064 OR13D1Q8NGV5 346 aa12.46□□□□□ -0.42
CNOT9-201ENST00000273064 CCL13Q99616 98 aa12.46□□□□□ -0.42
CNOT9-201ENST00000273064 ALPK3Q96L96 1907 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 DLK1P80370 383 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 ZNF561Q8N587 486 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 GMPPAQ96IJ6 420 aaPredicted RBP12.45□□□□□ -0.42
CNOT9-201ENST00000273064 CXXC4Q9H2H0 198 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 IGHV3-72A0A0B4J1Y9 119 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 NUDT19A8MXV4 375 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 R3HDM4Q96D70 268 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 OR2V2Q96R30 315 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 SEC11CQ9BY50 192 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 OR51I2Q9H344 312 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 IGSF23A1L1A6 192 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 COX7A1P24310 79 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 ACP1P24666 158 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 CLDN18P56856 261 aa12.45□□□□□ -0.42
CNOT9-201ENST00000273064 PSG7Q13046 419 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms