RNA–Protein interactions for RNA: ENST00000269318.9

CCDC40-201, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2 BASIC

Gene CCDC40, Length 1,970 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-201ENST00000269318 OR2D2Q9H210 308 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 NGBQ9NPG2 151 aa13.85□□□□□ -0.19
CCDC40-201ENST00000269318 MEX3AA1L020 520 aaKnown RBP13.84□□□□□ -0.19
CCDC40-201ENST00000269318 SPINT2O43291 252 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 GPR137BO60478 399 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 GAPDHP04406 335 aaKnown RBP13.84□□□□□ -0.19
CCDC40-201ENST00000269318 SLC25A6P12236 298 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 GZMHP20718 246 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 POLR2GP62487 172 aaKnown RBP eCLIP13.84□□□□□ -0.19
CCDC40-201ENST00000269318 NCMAPQ5T1S8 102 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 THOC7Q6I9Y2 204 aaKnown RBP13.84□□□□□ -0.19
CCDC40-201ENST00000269318 TGIF2LYQ8IUE0 185 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 ZNF561Q8N587 486 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 RFESDQ8TAC1 157 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 GPR146Q96CH1 333 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 BSCL2Q96G97 398 aaPredicted RBP13.84□□□□□ -0.19
CCDC40-201ENST00000269318 NCOR1P1Q9H4R4 102 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 PLEKHF2Q9H8W4 249 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 PFDN2Q9UHV9 154 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 RNF150Q9ULK6 438 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 POLEQ07864 2286 aa13.84□□□□□ -0.19
CCDC40-201ENST00000269318 I3L521 148 aa13.83□□□□□ -0.19
CCDC40-201ENST00000269318 FGF16O43320 207 aa13.83□□□□□ -0.19
CCDC40-201ENST00000269318 CCL8P80075 99 aa13.83□□□□□ -0.19
CCDC40-201ENST00000269318 TMED6Q8WW62 240 aa13.83□□□□□ -0.19
CCDC40-201ENST00000269318 LSM10Q969L4 123 aaKnown RBP13.83□□□□□ -0.19
CCDC40-201ENST00000269318 DCAF16Q9NXF7 216 aa13.83□□□□□ -0.19
CCDC40-201ENST00000269318 ADGRG4Q8IZF6 3080 aa13.83□□□□□ -0.2
CCDC40-201ENST00000269318 IGHV3-43A0A0B4J1X8 118 aa13.83□□□□□ -0.2
CCDC40-201ENST00000269318 A0A1B0GU03 582 aa13.83□□□□□ -0.2
CCDC40-201ENST00000269318 RNF212BA8MTL3 300 aa13.83□□□□□ -0.2
CCDC40-201ENST00000269318 CCL21O00585 134 aa13.83□□□□□ -0.2
CCDC40-201ENST00000269318 IGKV1-5P01602 117 aa13.83□□□□□ -0.2
CCDC40-201ENST00000269318 IGHV3-43DP0DP04 118 aa13.83□□□□□ -0.2
CCDC40-201ENST00000269318 SELLP14151 372 aa13.83□□□□□ -0.2
CCDC40-201ENST00000269318 TEX36Q5VZQ5 186 aa13.83□□□□□ -0.2
CCDC40-201ENST00000269318 AGMATQ9BSE5 352 aa13.83□□□□□ -0.2
CCDC40-201ENST00000269318 ESRP2Q9H6T0 727 aaKnown RBP13.83□□□□□ -0.2
CCDC40-201ENST00000269318 A0A1B0GW55 424 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 DUX4L2P0CJ85 424 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 DUX4L3P0CJ86 424 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 DUX4L4P0CJ87 422 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 DUX4L5P0CJ88 424 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 DUX4L6P0CJ89 424 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 DUX4L7P0CJ90 424 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 CGB3P0DN86 165 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 CGB7P0DN87 165 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 TNFRSF1AP19438 455 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 CHRNB4P30926 498 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 EIF5AP63241 154 aaKnown RBP13.82□□□□□ -0.2
CCDC40-201ENST00000269318 DUX4L9Q6RFH8 374 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-201ENST00000269318 CLEC9AQ6UXN8 241 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 ZCCHC24Q8N2G6 241 aaKnown RBP13.82□□□□□ -0.2
CCDC40-201ENST00000269318 C14orf79Q96F83 325 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 GAFA1Q96PS6 74 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 DUX4Q9UBX2 424 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 CACNA1DQ01668 2161 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 KIAA1324LA8MWY0 1029 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-201ENST00000269318 E7EQL1 145 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 TEX46H3BTG2 121 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 F2RL2O00254 374 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 JTBO76095 146 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 FGF2P09038 288 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 FAM157CP0CG43 387 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 MUC1P15941 1255 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-201ENST00000269318 ZNF16P17020 682 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-201ENST00000269318 RPL30P62888 115 aaKnown RBP13.82□□□□□ -0.2
CCDC40-201ENST00000269318 TLE1Q04724 770 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 ZNF788Q6ZQV5 615 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 Q6ZRM9 215 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 HSD17B13Q7Z5P4 300 aaPredicted RBP13.82□□□□□ -0.2
CCDC40-201ENST00000269318 EIF4E3Q8N5X7 224 aaKnown RBP13.82□□□□□ -0.2
CCDC40-201ENST00000269318 PLPPR2Q96GM1 343 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 SMIM3Q9BZL3 60 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 MAGT1Q9H0U3 335 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 JPT1Q9UK76 154 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 RNF115Q9Y4L5 304 aa13.82□□□□□ -0.2
CCDC40-201ENST00000269318 DSCAMO60469 2012 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 ICE1Q9Y2F5 2266 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 SSSCA1O60232 199 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 IRF2P14316 349 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 EDDM3BP56851 147 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 LOXL3P58215 753 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 FAM209AQ5JX71 171 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 ZNF808Q8N4W9 903 aaPredicted RBP13.81□□□□□ -0.2
CCDC40-201ENST00000269318 OR2C3Q8N628 320 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 UBAC2Q8NBM4 344 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 LRRC20Q8TCA0 184 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 RNASE6Q93091 150 aaKnown RBP13.81□□□□□ -0.2
CCDC40-201ENST00000269318 ARV1Q9H2C2 271 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 PRORYQ9H606 182 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 WFDC1Q9HC57 220 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 OR6C3Q9NZP0 311 aa13.81□□□□□ -0.2
CCDC40-201ENST00000269318 FAM90A27PA6NNH2 459 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 VSTM5A8MXK1 200 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 A8MXK9 166 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 DEFB108AA8MXU0 73 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 TMEM50AO95807 157 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 MMP9P14780 707 aa13.8□□□□□ -0.2
CCDC40-201ENST00000269318 PVALBP20472 110 aaPredicted RBP13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms