RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 FAM90A12PA8MX19 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A5PA8MXJ8 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A23PA8MXZ1 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 CHEK1O14757 476 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 NDUFA2O43678 99 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A15PP0C7V4 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A13PP0C7W8 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A14PP0C7W9 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 FAM90A24PP0C7X0 464 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 IGHV1-2P23083 117 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 CD40P25942 277 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 TMEM50BP56557 158 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 RHOBP62745 196 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 PJVKQ0ZLH3 352 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 PHYHD1Q5SRE7 291 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 GCSAMQ8N6F7 178 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 BVESQ8NE79 360 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 OR10G4Q8NGN3 311 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 OR10G9Q8NGN4 311 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 OR10G7Q8NGN6 311 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 B9A039 149 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 CTRB1P17538 263 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 P2RY1P47900 373 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 CDC34P49427 236 aaPredicted RBP11.77□□□□□ -0.52
NPC1-201ENST00000269228 NDUFA6P56556 154 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 CTRB2Q6GPI1 263 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 BCL2L2Q92843 193 aaPredicted RBP11.77□□□□□ -0.52
NPC1-201ENST00000269228 OR51I2Q9H344 312 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 IFT22Q9H7X7 185 aa11.77□□□□□ -0.52
NPC1-201ENST00000269228 SERTM2A0A1B0GWG4 89 aa11.77□□□□□ -0.53
NPC1-201ENST00000269228 IFNL4K9M1U5 179 aa11.77□□□□□ -0.53
NPC1-201ENST00000269228 CDS2O95674 445 aa11.77□□□□□ -0.53
NPC1-201ENST00000269228 OR1B1Q8NGR6 318 aa11.77□□□□□ -0.53
NPC1-201ENST00000269228 OR1L8Q8NGR8 309 aa11.77□□□□□ -0.53
NPC1-201ENST00000269228 GRAMD2BQ96HH9 432 aa11.77□□□□□ -0.53
NPC1-201ENST00000269228 SH2D2AQ9NP31 389 aa11.77□□□□□ -0.53
NPC1-201ENST00000269228 AANATQ16613 207 aa11.77□□□□□ -0.53
NPC1-201ENST00000269228 GUK1Q16774 197 aa11.77□□□□□ -0.53
NPC1-201ENST00000269228 VAX1Q5SQQ9 334 aa11.77□□□□□ -0.53
NPC1-201ENST00000269228 XKRY2A2RUG3 117 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 J3QW42 95 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 SLC25A5P05141 298 aaKnown RBP11.76□□□□□ -0.53
NPC1-201ENST00000269228 ELF5Q9UKW6 265 aaPredicted RBP11.76□□□□□ -0.53
NPC1-201ENST00000269228 DIDO1Q9BTC0 2240 aaKnown RBP11.76□□□□□ -0.53
NPC1-201ENST00000269228 HMSDA8MTL9 139 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 J3QR06 171 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 SMPD2O60906 423 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 APOBEC3AP31941 199 aaPredicted RBP11.76□□□□□ -0.53
NPC1-201ENST00000269228 ARF6P62330 175 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 H3F3AP84243 136 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 TMEM255AQ5JRV8 349 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 ARTNQ5T4W7 220 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 SSMEM1Q8WWF3 244 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 OR5P3Q8WZ94 311 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 NPAS1Q99742 590 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 CALYQ9NYX4 217 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 OPN4Q9UHM6 478 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 LOC390937A0A1W2PQ73 354 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 ST6GAL2Q96JF0 529 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 NEUROG3Q9Y4Z2 214 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 ESPL1Q14674 2120 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 A0A1B0GU03 582 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 GAPDHP04406 335 aaKnown RBP11.76□□□□□ -0.53
NPC1-201ENST00000269228 FGF8P55075 233 aaPredicted RBP11.76□□□□□ -0.53
NPC1-201ENST00000269228 GFRA1P56159 465 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 BSPH1Q075Z2 132 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 SAXO1Q8IYX7 474 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 OR11H7Q8NGC8 314 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 Q96M66 194 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 PIMREGQ9BSJ6 248 aa11.76□□□□□ -0.53
NPC1-201ENST00000269228 LRRC3CA6NJW4 275 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 H0Y8G0 127 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 RNASEK-C17orf49H0YIS7 233 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 DNASE2O00115 360 aaPredicted RBP11.75□□□□□ -0.53
NPC1-201ENST00000269228 IFITM3Q01628 133 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 PDZD11Q5EBL8 140 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 PLAC9Q5JTB6 97 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 OR1L4Q8NGR5 311 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 ANGPTL6Q8NI99 470 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 CABLES2Q9BTV7 478 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 POMT1Q9Y6A1 747 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 IGLV3-32A0A0A0MS00 114 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 GLIPR1P48060 266 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 SIRT7Q9NRC8 400 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 RCC2Q9P258 522 aaKnown RBP11.75□□□□□ -0.53
NPC1-201ENST00000269228 IGHV3-21A0A0B4J1V1 117 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 PPIAL4CA0A0B4J2A2 164 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 SCGB1D1O95968 90 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 PPIAL4GP0DN37 164 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 ABLIM2Q6H8Q1 611 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 C1orf162Q8NEQ5 155 aaPredicted RBP11.75□□□□□ -0.53
NPC1-201ENST00000269228 BDP1A6H8Y1 2624 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 WNT9BO14905 357 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 HPRT1P00492 218 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 ZNF788Q6ZQV5 615 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 ATP5SQ99766 215 aa11.75□□□□□ -0.53
NPC1-201ENST00000269228 IGHV2OR16-5A0A0B4J2B6 119 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 hCG_38984A0A1B0GV85 526 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 CELA3BP08861 270 aa11.74□□□□□ -0.53
NPC1-201ENST00000269228 NPY1RP25929 384 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms