RNA–Protein interactions for RNA: ENST00000269137.11

SS18-201, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SS18, Length 1,836 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-201ENST00000269137 DVL1O14640 695 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 HSD17B6O14756 317 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 YPEL1O60688 119 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 SIX6O95475 246 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 F12P00748 615 aaPredicted RBP11.67□□□□□ -0.54
SS18-201ENST00000269137 IGLV2-14P01704 120 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 OR8U9P0C7N5 309 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
SS18-201ENST00000269137 EFNA4P52798 201 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 RPL31P62899 125 aaKnown RBP11.67□□□□□ -0.54
SS18-201ENST00000269137 TMEM155Q4W5P6 130 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 DCAF12L2Q5VW00 463 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 C9orf62Q8N4C0 152 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 LRTM2Q8N967 370 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 CLEC18CQ8NCF0 446 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 OR2T35Q8NGX2 323 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 OR8U1Q8NH10 309 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 IGFBPL1Q8WX77 278 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 YPEL2Q96QA6 119 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 CHIAQ9BZP6 476 aa11.67□□□□□ -0.54
SS18-201ENST00000269137 PGLYRP1O75594 196 aaPredicted RBP11.66□□□□□ -0.54
SS18-201ENST00000269137 LY6HO94772 140 aa11.66□□□□□ -0.54
SS18-201ENST00000269137 OR5AC1P0C628 307 aa11.66□□□□□ -0.54
SS18-201ENST00000269137 CDKN1AP38936 164 aa11.66□□□□□ -0.54
SS18-201ENST00000269137 TBC1D26Q86UD7 250 aa11.66□□□□□ -0.54
SS18-201ENST00000269137 ZBTB34Q8NCN2 500 aa11.66□□□□□ -0.54
SS18-201ENST00000269137 GLYATL2Q8WU03 294 aa11.66□□□□□ -0.54
SS18-201ENST00000269137 EDARADDQ8WWZ3 215 aa11.66□□□□□ -0.54
SS18-201ENST00000269137 GNG12Q9UBI6 72 aa11.66□□□□□ -0.54
SS18-201ENST00000269137 HSPB11Q9Y547 144 aa11.66□□□□□ -0.54
SS18-201ENST00000269137 RBM7Q9Y580 266 aaKnown RBP11.66□□□□□ -0.54
SS18-201ENST00000269137 MALRD1Q5VYJ5 2156 aa11.66□□□□□ -0.54
SS18-201ENST00000269137 C3orf85A0A1B0GTC6 90 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 G3V3Q6 166 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 ITGB1BP1O14713 200 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 GPR37O15354 613 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 B3GALNT1O75752 331 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 RGS11O94810 467 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 S100A1P23297 94 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 MORN2Q502X0 79 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 FAM53AQ6NSI3 398 aaPredicted RBP11.65□□□□□ -0.54
SS18-201ENST00000269137 LIAT1Q6ZQX7 453 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 OR10A7Q8NGE5 316 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 OR52M1Q8NGK5 317 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 GRPEL2Q8TAA5 225 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 MSI2Q96DH6 328 aaKnown RBP11.65□□□□□ -0.54
SS18-201ENST00000269137 C19orf12Q9NSK7 152 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 GFOD1Q9NXC2 390 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 PRR13Q9NZ81 148 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 MIOXQ9UGB7 285 aa11.65□□□□□ -0.54
SS18-201ENST00000269137 TRBV23-1A0A0A0MS06 115 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 IGHV3-43A0A0B4J1X8 118 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 PPIHO43447 177 aaKnown RBP11.65□□□□□ -0.55
SS18-201ENST00000269137 IGHV3-43DP0DP04 118 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 SRPXP78539 464 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 SP6Q3SY56 376 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 TMEM200BQ69YZ2 307 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 ZNF841Q6ZN19 808 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 ZNF645Q8N7E2 425 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 OR11H4Q8NGC9 324 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 TP53RKQ96S44 253 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 AGMATQ9BSE5 352 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 TMEM222Q9H0R3 208 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 GAL3ST2Q9H3Q3 398 aa11.65□□□□□ -0.55
SS18-201ENST00000269137 H0Y980 276 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 CCSO14618 274 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 PHF1O43189 567 aaPredicted RBP11.64□□□□□ -0.55
SS18-201ENST00000269137 CLDN1O95832 211 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 DNASE1P24855 282 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 F2RP25116 425 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 AVPI1Q5T686 147 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 GSG1LQ6UXU4 331 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 LGI3Q8N145 548 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 DRAM1Q8N682 238 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 WDR89Q96FK6 387 aaPredicted RBP11.64□□□□□ -0.55
SS18-201ENST00000269137 IDI2-AS1Q9NZ38 188 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 RALYQ9UKM9 306 aaKnown RBP11.64□□□□□ -0.55
SS18-201ENST00000269137 KCNS2Q9ULS6 477 aa11.64□□□□□ -0.55
SS18-201ENST00000269137 OMGP23515 440 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 UCP1P25874 307 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 ZNF273Q14593 569 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 LTC4SQ16873 150 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 SP5Q6BEB4 398 aaPredicted RBP11.63□□□□□ -0.55
SS18-201ENST00000269137 H1FXQ92522 213 aaKnown RBP11.63□□□□□ -0.55
SS18-201ENST00000269137 C18orf12Q96KH6 178 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 TMEM56Q96MV1 263 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 ZNF714Q96N38 554 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 OR2D2Q9H210 308 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 RPUSD1Q9UJJ7 312 aaKnown RBP11.63□□□□□ -0.55
SS18-201ENST00000269137 TMEM56-RWDD3S4R434 201 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 USP9YO00507 2555 aaPredicted RBP11.63□□□□□ -0.55
SS18-201ENST00000269137 UTP20O75691 2785 aaKnown RBP11.63□□□□□ -0.55
SS18-201ENST00000269137 SPG11Q96JI7 2443 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 YLPM1P49750 1951 aaKnown RBP11.63□□□□□ -0.55
SS18-201ENST00000269137 NDUFS7O75251 213 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 ADAP1O75689 374 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 COX6B1P14854 86 aa11.63□□□□□ -0.55
SS18-201ENST00000269137 CYCSP99999 105 aaKnown RBP11.63□□□□□ -0.55
SS18-201ENST00000269137 EIF4EBP1Q13541 118 aaPredicted RBP11.63□□□□□ -0.55
SS18-201ENST00000269137 HEPN1Q6WQI6 88 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms