RNA–Protein interactions for RNA: ENST00000264187.6

NID1-201, Transcript of nidogen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NID1, Length 5,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NID1-201ENST00000264187 RBFOX2O43251 390 aaKnown RBP eCLIP13.14□□□□□ -0.31
NID1-201ENST00000264187 STPG2Q8N412 459 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 APOBEC4Q8WW27 367 aaKnown RBP13.14□□□□□ -0.31
NID1-201ENST00000264187 PRSS27Q9BQR3 290 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 COL25A1Q9BXS0 654 aaPredicted RBP13.14□□□□□ -0.31
NID1-201ENST00000264187 KLK13Q9UKR3 277 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 AKAP12Q02952 1782 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 A8MWL6 223 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 NXPH1P58417 271 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 TFF2Q03403 129 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 SYT8Q8NBV8 401 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 PPIAL4EA0A075B759 164 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 PSMB11A5LHX3 300 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 PPIAL4DF5H284 164 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 LINC00869P0C866 280 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 PPIAL4FP0DN26 164 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 RHBDD2Q6NTF9 364 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 PPIAL4AQ9Y536 164 aa13.14□□□□□ -0.31
NID1-201ENST00000264187 IGKV3-20P01619 116 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 BCL2P10415 239 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 MUC1P15941 1255 aaPredicted RBP13.13□□□□□ -0.31
NID1-201ENST00000264187 KIAA1644Q3SXP7 199 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 WNT5BQ9H1J7 359 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 PRDX2P32119 198 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 GPR6P46095 362 aaPredicted RBP13.13□□□□□ -0.31
NID1-201ENST00000264187 ST6GALNAC3Q8NDV1 305 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 TMEM171Q8WVE6 324 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 RNF133Q8WVZ7 376 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 LSM10Q969L4 123 aaKnown RBP13.13□□□□□ -0.31
NID1-201ENST00000264187 PHLDA3Q9Y5J5 127 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 CDS2O95674 445 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 DLX6P56179 175 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 OR2Y1Q8NGV0 311 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 WIPI2Q9Y4P8 454 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 GPHA2Q96T91 129 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 METTL1Q9UBP6 276 aaKnown RBP13.13□□□□□ -0.31
NID1-201ENST00000264187 SHROOM3Q8TF72 1996 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 NUP205Q92621 2012 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 OR4C45A6NMZ5 311 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 TSPAN2O60636 221 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 FCGR2BP31994 310 aaPredicted RBP13.13□□□□□ -0.31
NID1-201ENST00000264187 SMAGPQ0VAQ4 97 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 PQLC2Q6ZP29 291 aa13.13□□□□□ -0.31
NID1-201ENST00000264187 CDX2Q99626 313 aaPredicted RBP13.13□□□□□ -0.31
NID1-201ENST00000264187 KIAA0100Q14667 2235 aaKnown RBP13.12□□□□□ -0.31
NID1-201ENST00000264187 LRRC37A3O60309 1634 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 SPAARA0A1B0GVQ0 90 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 C16orf97H3BN30 126 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 K7N7A8 449 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 PITX3O75364 302 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 LEPROTL1O95214 131 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 IGHV4-34P06331 123 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 RPL27AP46776 148 aaKnown RBP13.12□□□□□ -0.31
NID1-201ENST00000264187 MBNL2Q5VZF2 373 aaKnown RBP13.12□□□□□ -0.31
NID1-201ENST00000264187 SF3B5Q9BWJ5 86 aaKnown RBP13.12□□□□□ -0.31
NID1-201ENST00000264187 OR5AC2Q9NZP5 309 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 NPVFQ9HCQ7 196 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 IGLV3-16A0A075B6K0 115 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 TMEM262E9PQX1 116 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 PLA2G10O15496 165 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 ADRA2AP08913 450 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 EID2BQ96D98 161 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 ZNF385AQ96PM9 386 aaKnown RBP13.12□□□□□ -0.31
NID1-201ENST00000264187 CXCL10P02778 98 aa13.12□□□□□ -0.31
NID1-201ENST00000264187 ZNF98A6NK75 572 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 TNFSF14O43557 240 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 SEC11BP0C7V7 166 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 IGHV3-35A0A0C4DH35 117 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 ZPLD1Q8TCW7 415 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 ZNF714Q96N38 554 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 PARLQ9H300 379 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 TGIF2-C20orf24A0A0A6YYL0 155 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 DCAF12L2Q5VW00 463 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 MIC13Q5XKP0 118 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 ZDHHC8Q9ULC8 765 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 TBL2Q9Y4P3 447 aaKnown RBP13.11□□□□□ -0.31
NID1-201ENST00000264187 MRPS18BQ9Y676 258 aaKnown RBP13.11□□□□□ -0.31
NID1-201ENST00000264187 REG1AP05451 166 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 CISD3P0C7P0 127 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 CCDC144NLQ6NUI1 221 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 SCNM1Q9BWG6 230 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 TMEM56-RWDD3S4R434 201 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 LY6EQ16553 131 aa13.11□□□□□ -0.31
NID1-201ENST00000264187 NPBWR2P48146 333 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 CX3CL1P78423 397 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 TMEM177Q53S58 311 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 ZNF506Q5JVG8 444 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 MRPL18Q9H0U6 180 aaKnown RBP13.1□□□□□ -0.31
NID1-201ENST00000264187 RP1P56715 2156 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 HPRT1P00492 218 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 IGHV3-48P01763 117 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 ANOS1P23352 680 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 DRD3P35462 400 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 UNQ5815/PRO19632Q6UWF5 114 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 LINC00470Q9BZP3 86 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 ZNF56Q15929 161 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 WNT16Q9UBV4 365 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 SRSF12Q8WXF0 261 aaKnown RBP13.1□□□□□ -0.31
NID1-201ENST00000264187 CHST5Q9GZS9 411 aa13.1□□□□□ -0.31
NID1-201ENST00000264187 TNFSF18Q9UNG2 199 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms