RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 A8MXK9 166 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 TUSC2O75896 110 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 RLN1P04808 185 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 OR8U9P0C7N5 309 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 IGHV1-8P0DP01 117 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 PGAM2P15259 253 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 HERV-K104P61576 105 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 HTD2P86397 168 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 METTL11BQ5VVY1 283 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 HEPN1Q6WQI6 88 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 CIARTQ8N365 385 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 ADAD2Q8NCV1 583 aaKnown RBP7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 OR8U1Q8NH10 309 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 SECTM1Q8WVN6 248 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 DACT3Q96B18 629 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 GPHA2Q96T91 129 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 C20orf85Q9H1P6 137 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 CCL28Q9NRJ3 127 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 PSG11Q9UQ72 335 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.97□□□□□ -1.135e-8■■■□□ 18.7
SNRNP40-201ENST00000263694 IGHV2-70DA0A0C4DH43 119 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 HSD17B6O14756 317 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 ENSAO43768 121 aaKnown RBP7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 FOXH1O75593 365 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 DIRAS3O95661 229 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 H2AFB2P0C5Z0 115 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 ANXA7P20073 488 aaKnown RBP7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 KLRD1Q13241 179 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 RBMS2Q15434 407 aaKnown RBP7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 CT45A1Q5HYN5 189 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 PLET1Q6UQ28 207 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 PRSS57Q6UWY2 283 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 TMED4Q7Z7H5 227 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 PDZD9Q8IXQ8 264 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 CT45A3Q8NHU0 189 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 CAPSLQ8WWF8 208 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 MOB3AQ96BX8 217 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 ABHD14BQ96IU4 210 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 RTBDNQ9BSG5 229 aaPredicted RBP7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 SLC5A7Q9GZV3 580 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 SIRT7Q9NRC8 400 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 OR2W1Q9Y3N9 320 aa7.97□□□□□ -1.13
SNRNP40-201ENST00000263694 ABCA1O95477 2261 aa7.96□□□□□ -1.13
SNRNP40-201ENST00000263694 FLNAP21333 2647 aaKnown RBP7.96□□□□□ -1.13
SNRNP40-201ENST00000263694 ZNF469Q96JG9 3925 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 CREBBPQ92793 2442 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 hCG_2014768A0A024R1R8 64 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 SMAD7O15105 426 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 YPEL1O60688 119 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 VSIG10L2P0DP72 767 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 COX7A1P24310 79 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 GNRHRP30968 328 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 LUMP51884 338 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 PHLDA2Q53GA4 152 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 ZNF818PQ6ZRF7 136 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 C1orf229Q6ZS94 237 aaPredicted RBP7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 ZNF439Q8NDP4 499 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 RBMXL1Q96E39 390 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 C5orf30Q96GV9 206 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 YPEL2Q96QA6 119 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 FOXC2Q99958 501 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 C5orf66Q9H5L9 145 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 JPT1Q9UK76 154 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 GPR132Q9UNW8 380 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 RBM7Q9Y580 266 aaKnown RBP7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 NUBP2Q9Y5Y2 271 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 SESN1Q9Y6P5 492 aa7.96□□□□□ -1.14
SNRNP40-201ENST00000263694 ACANP16112 2415 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 AKAP9Q99996 3911 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 SVEP1Q4LDE5 3571 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 CSPG4Q6UVK1 2322 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 A0A0B4J293 547 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 A0A1W2PPH5 198 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 A0A1W2PRD5 423 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 A0A1W2PRF3 423 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 A0A1W2PRM7 423 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 INMT-MINDY4F8WBC2 141 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 TNFSF12O43508 249 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 IGLV2-14P01704 120 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 AKR1C4P17516 323 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 DVL1P1P54792 670 aaPredicted RBP7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 LINC00205P59089 165 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 LOXL1Q08397 574 aaPredicted RBP7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 BTNL3Q6UXE8 466 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 Q6ZNX1 250 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 VMO1Q7Z5L0 202 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 ABHD12Q8N2K0 398 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 PNKDQ8N490 385 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 OR52M1Q8NGK5 317 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 MSI2Q96DH6 328 aaKnown RBP7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 SLC25A21Q9BQT8 299 aaPredicted RBP7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 AGMATQ9BSE5 352 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 MARVELD1Q9BSK0 173 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 PCGF1Q9BSM1 259 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 TOLLIPQ9H0E2 274 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 SIRPDQ9H106 197 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 OR2D2Q9H210 308 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 TMEM133Q9H2Q1 129 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 KCNS2Q9ULS6 477 aa7.95□□□□□ -1.14
SNRNP40-201ENST00000263694 POLR3KQ9Y2Y1 108 aaPredicted RBP7.95□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms