RNA–Protein interactions for RNA: ENST00000262018.7

SGCA-201, Transcript of sarcoglycan alpha, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SGCA, Length 1,432 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-201ENST00000262018 C4orf46Q504U0 113 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 SPRNQ5BIV9 151 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 GAPTQ8N292 157 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 MUC20Q8N307 709 aaPredicted RBP10.94□□□□□ -0.66
SGCA-201ENST00000262018 TMEM185AQ8NFB2 350 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 ERGIC1Q969X5 290 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 TIMD4Q96H15 378 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 MMP26Q9NRE1 261 aa10.94□□□□□ -0.66
SGCA-201ENST00000262018 IGHV3OR16-10A0A075B7F0 116 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 KIR2DS1A0A191URI9 304 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 HSPB6O14558 160 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 LHBP01229 141 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 CXCL3P19876 107 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 ZBTB25P24278 435 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 KIR2DS4P43632 304 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 NPY4RP50391 375 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 NKX2-5P52952 324 aaPredicted RBP10.93□□□□□ -0.66
SGCA-201ENST00000262018 KIR2DS1Q14954 304 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 HFEQ30201 348 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 LIN54Q6MZP7 749 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 C11orf88Q6PI97 169 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 ZNF497Q6ZNH5 498 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 MOGAT3Q86VF5 341 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 RAB1CQ92928 201 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 ZNF2Q9BSG1 426 aaPredicted RBP10.93□□□□□ -0.66
SGCA-201ENST00000262018 TMEM165Q9HC07 324 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 TNFRSF19Q9NS68 423 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 PPP1R3CQ9UQK1 317 aa10.93□□□□□ -0.66
SGCA-201ENST00000262018 HMSDA8MTL9 139 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 TRDCB7Z8K6 153 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP10.92□□□□□ -0.66
SGCA-201ENST00000262018 HOXA3O43365 443 aaPredicted RBP10.92□□□□□ -0.66
SGCA-201ENST00000262018 FOXH1O75593 365 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 HLA-GP17693 338 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 KCNJ3P48549 501 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 RELBQ01201 579 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 IFITM2Q01629 132 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 MOB1BQ7L9L4 216 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 REC114Q7Z4M0 266 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 LYG2Q86SG7 212 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 GCSAMQ8N6F7 178 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 ADAD2Q8NCV1 583 aaKnown RBP10.92□□□□□ -0.66
SGCA-201ENST00000262018 PLPPR1Q8TBJ4 325 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 Q8TCH9 128 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 RTBDNQ9BSG5 229 aaPredicted RBP10.92□□□□□ -0.66
SGCA-201ENST00000262018 C5orf66Q9H5L9 145 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 C1RLQ9NZP8 487 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 MGAT4CQ9UBM8 478 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 OR14J1Q9UGF5 321 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 PPIAL4EA0A075B759 164 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 PPIAL4CA0A0B4J2A2 164 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 MDFIC2A0A1B0GVS7 189 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 PPIAL4DF5H284 164 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 CTXN2P0C2S0 81 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 PPIAL4FP0DN26 164 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 GLP1RP43220 463 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 CEBPDP49716 269 aaPredicted RBP10.92□□□□□ -0.66
SGCA-201ENST00000262018 LOXL3P58215 753 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 DHRS2Q13268 280 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 PPP1R1AQ13522 171 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 C9orf62Q8N4C0 152 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 C12orf45Q8N5I9 185 aaPredicted RBP10.92□□□□□ -0.66
SGCA-201ENST00000262018 OR2AK2Q8NG84 335 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 OR2T35Q8NGX2 323 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 CCL17Q92583 94 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 FXYD6Q9H0Q3 95 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 GCM1Q9NP62 436 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 MGAT4AQ9UM21 535 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 HSPB11Q9Y547 144 aa10.92□□□□□ -0.66
SGCA-201ENST00000262018 A0A0B4J2A0 478 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 C9orf170A2RU37 121 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 RFPL4AA6NLU0 287 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 LRRC30A6NM36 301 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 RFPL4AL1F8VTS6 287 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 PSPNO60542 156 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 NDUFA7O95182 113 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 CTSDP07339 412 aaPredicted RBP10.91□□□□□ -0.66
SGCA-201ENST00000262018 SCTP09683 121 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 PSG2P11465 335 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 PGAM2P15259 253 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 FCGR2CP31995 323 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 UCP3P55916 312 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 HLA-DRB3P79483 266 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 HOXA4Q00056 320 aaPredicted RBP10.91□□□□□ -0.66
SGCA-201ENST00000262018 TMEM128Q5BJH2 165 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 IGSF11Q5DX21 431 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 KPRPQ5T749 579 aaPredicted RBP10.91□□□□□ -0.66
SGCA-201ENST00000262018 SLC35E4Q6ICL7 350 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 CD177Q8N6Q3 437 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 UXS1Q8NBZ7 420 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 OR4A4PQ8NGN8 299 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 ZDHHC16Q969W1 377 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 TMEM230Q96A57 120 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 MOB3AQ96BX8 217 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 PHB2Q99623 299 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 TMEM106BQ9NUM4 274 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 RNF7Q9UBF6 113 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 SHPKQ9UHJ6 478 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 RNF114Q9Y508 228 aa10.91□□□□□ -0.66
SGCA-201ENST00000262018 TANC2Q9HCD6 1990 aa10.91□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms