RNA–Protein interactions for RNA: ENST00000261584.8

PALB2-201, Transcript of partner and localizer of BRCA2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PALB2, Length 4,003 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-201ENST00000261584 GCSAMLQ5JQS6 135 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 ETFRF1Q6IPR1 90 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 NHLRC2Q8NBF2 726 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 EDARADDQ8WWZ3 215 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 MRPL13Q9BYD1 178 aaKnown RBP8.68□□□□□ -1.02
PALB2-201ENST00000261584 MYOZ1Q9NP98 299 aaPredicted RBP8.68□□□□□ -1.02
PALB2-201ENST00000261584 ABI3Q9P2A4 366 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 SPG11Q96JI7 2443 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 IGHV5-10-1A0A0J9YXX1 117 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 C1QTNF9BB2RNN3 333 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 F6UZH7 168 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 ST8SIA5O15466 376 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 HOXA5P20719 270 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 ERVFC1-1P60608 527 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 OR5I1Q13606 314 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 OR52L2PQ8NGH6 319 aa8.68□□□□□ -1.02
PALB2-201ENST00000261584 PGLYRP1O75594 196 aaPredicted RBP8.67□□□□□ -1.02
PALB2-201ENST00000261584 AGFG2O95081 481 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 ERVK-16P61578 105 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 ICAM4Q14773 271 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 ASPHD1Q5U4P2 390 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 SGMS2Q8NHU3 365 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 RCC1LQ96I51 464 aaKnown RBP8.67□□□□□ -1.02
PALB2-201ENST00000261584 TMEM38BQ9NVV0 291 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 RNF24Q9Y225 148 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 DMRT1Q9Y5R6 373 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 GTF3C1Q12789 2109 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 LOC390937A0A1W2PQ73 354 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 HLA-GP17693 338 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 F2RP25116 425 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 TFPI2P48307 235 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 SUMO3P55854 103 aaPredicted RBP8.67□□□□□ -1.02
PALB2-201ENST00000261584 C1orf53Q5VUE5 145 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 HEPN1Q6WQI6 88 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 MOB3AQ96BX8 217 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 ACTR3CQ9C0K3 210 aaPredicted RBP8.67□□□□□ -1.02
PALB2-201ENST00000261584 FKBP11Q9NYL4 201 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 FOXD3Q9UJU5 478 aaPredicted RBP8.67□□□□□ -1.02
PALB2-201ENST00000261584 SIT1Q9Y3P8 196 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 PRR19A6NJB7 356 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 ZNF729A6NN14 1252 aaPredicted RBP8.67□□□□□ -1.02
PALB2-201ENST00000261584 FCN1O00602 326 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 CST2P09228 141 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 COX5AP20674 150 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 AGAP20933 346 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 OTX1P32242 354 aaPredicted RBP8.67□□□□□ -1.02
PALB2-201ENST00000261584 MAGEA5P43359 124 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 IER3P46695 156 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 PKIAP61925 76 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 LSM6P62312 80 aaKnown RBP8.67□□□□□ -1.02
PALB2-201ENST00000261584 ZP4Q12836 540 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 TMEM164Q5U3C3 297 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 MUCL1Q96DR8 90 aa8.67□□□□□ -1.02
PALB2-201ENST00000261584 CHD3Q12873 2000 aaKnown RBP8.66□□□□□ -1.02
PALB2-201ENST00000261584 GALR2O43603 387 aaPredicted RBP8.66□□□□□ -1.02
PALB2-201ENST00000261584 GYPAP02724 150 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 CAMPP49913 170 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 GNG10P50151 68 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 SUCLG1P53597 346 aaKnown RBP8.66□□□□□ -1.02
PALB2-201ENST00000261584 PPP1CBP62140 327 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 RAC1P63000 192 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 DCTN5Q9BTE1 182 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 A0A0G2JRQ6 117 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 M0R1X1 148 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 ZG16O60844 167 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 TMEM50AO95807 157 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 PAX5Q02548 391 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 MRPL49Q13405 166 aaKnown RBP8.66□□□□□ -1.02
PALB2-201ENST00000261584 FXYD3Q14802 87 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 SSX7Q7RTT5 188 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 LHFPL1Q86WI0 220 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 C1orf147Q96MC9 270 aaPredicted RBP8.66□□□□□ -1.02
PALB2-201ENST00000261584 LYRM2Q9NU23 88 aaPredicted RBP8.66□□□□□ -1.02
PALB2-201ENST00000261584 NAT8BQ9UHF3 227 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 A0A1W2PRD5 423 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 A0A1W2PRF3 423 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 A0A1W2PRM7 423 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 SLC17A3O00476 420 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 CDS2O95674 445 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 LIFP15018 202 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 PMELP40967 661 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 IL24Q13007 206 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 CATR1Q13166 79 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 OR4X1Q8NH49 305 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 OR1L1Q8NH94 360 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 MSI2Q96DH6 328 aaKnown RBP8.66□□□□□ -1.02
PALB2-201ENST00000261584 LRFN3Q9BTN0 628 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 GPR35Q9HC97 309 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 VAX2Q9UIW0 290 aa8.66□□□□□ -1.02
PALB2-201ENST00000261584 PLXNA2O75051 1894 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 WNT9BO14905 357 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 CBLN1P23435 193 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 GLIPR1P48060 266 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 GINS3Q9BRX5 216 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 DDA1Q9BW61 102 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 PARLQ9H300 379 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 TECRQ9NZ01 308 aaKnown RBP8.65□□□□□ -1.02
PALB2-201ENST00000261584 BOKQ9UMX3 212 aaPredicted RBP8.65□□□□□ -1.02
PALB2-201ENST00000261584 TCF21O43680 179 aa8.65□□□□□ -1.02
PALB2-201ENST00000261584 PITX3O75364 302 aa8.65□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms