RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 ADMP35318 185 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 DEFB109BQ30KR1 87 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 OR10G8Q8NGN5 311 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 UTRNP46939 3433 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 CACNA1BQ00975 2339 aa11.3□□□□□ -0.6
TMEM260-201ENST00000261556 TRAV26-1A0A087WT03 109 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 IGHV1OR21-1A0A087WYE8 117 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 IL3RAP26951 378 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 TSPOP30536 169 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 C6orf201Q7Z4U5 140 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 VASH2Q86V25 355 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 C1orf210Q8IVY1 113 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 TMEM252Q8N6L7 170 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 ASB5Q8WWX0 329 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 AMELYQ99218 206 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 PLEKHA3Q9HB20 300 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 CES1P1Q9UKY3 287 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 ST3GAL6Q9Y274 331 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 KLF13Q9Y2Y9 288 aaPredicted RBP11.29□□□□□ -0.6
TMEM260-201ENST00000261556 K7N7A8 449 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 LMX1BO60663 402 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 SLC38A9Q8NBW4 561 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 OR4C3Q8NH37 302 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 NAA60Q9H7X0 242 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 SLC5A6Q9Y289 635 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 IGHV3-64DA0A0J9YX35 117 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 SH2D1BO14796 132 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 HYPMO75409 117 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 THY1P04216 161 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 EMDP50402 254 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 ZNF83P51522 516 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 MZT1Q08AG7 82 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 PDCD1Q15116 288 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 SLC25A34Q6PIV7 304 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 H1FOOQ8IZA3 346 aaPredicted RBP11.29□□□□□ -0.6
TMEM260-201ENST00000261556 SP7Q8TDD2 431 aaPredicted RBP11.29□□□□□ -0.6
TMEM260-201ENST00000261556 RPRMQ9NS64 109 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 LRP12Q9Y561 859 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 ANKRD31Q8N7Z5 1873 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 K7EQS6 105 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 ERVK-16P61578 105 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 PPP1CAP62136 330 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 RPL18Q07020 188 aaKnown RBP11.29□□□□□ -0.6
TMEM260-201ENST00000261556 TGIF2LYQ8IUE0 185 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 SCARF2Q96GP6 870 aaPredicted RBP11.29□□□□□ -0.6
TMEM260-201ENST00000261556 TIMP4Q99727 224 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 GNG12Q9UBI6 72 aa11.29□□□□□ -0.6
TMEM260-201ENST00000261556 PIGBOS1A0A0B4J2F0 54 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 C11orf94C9JXX5 98 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 C5orf67F2Z3F1 127 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 SRP14P37108 136 aaKnown RBP11.28□□□□□ -0.6
TMEM260-201ENST00000261556 C19orf35Q6ZS72 473 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 OR1B1Q8NGR6 318 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 FAM173AQ9BQD7 235 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 PRSS27Q9BQR3 290 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 FSCN3Q9NQT6 498 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 ICAM5Q9UMF0 924 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 ZNF646O15015 1829 aaPredicted RBP11.28□□□□□ -0.6
TMEM260-201ENST00000261556 J3QRE1 110 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 PRRG2O14669 202 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 ZNF17P17021 662 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 AZU1P20160 251 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 OR3A4PP47883 348 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 FUT6P51993 359 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 FOXL2P58012 376 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 MESP2Q0VG99 397 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 CPEB4Q17RY0 729 aaKnown RBP eCLIP11.28□□□□□ -0.6
TMEM260-201ENST00000261556 CXorf66Q5JRM2 361 aaPredicted RBP11.28□□□□□ -0.6
TMEM260-201ENST00000261556 MRPL52Q86TS9 123 aaKnown RBP11.28□□□□□ -0.6
TMEM260-201ENST00000261556 OTOSQ8NHW6 89 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 OR2A5Q96R48 311 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 FAM60AQ9NP50 221 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 TRAPPC2LQ9UL33 140 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 A0A0A6YYD5 115 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 KLK10O43240 276 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 UPK3AO75631 287 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 INSM1Q01101 510 aaPredicted RBP11.28□□□□□ -0.6
TMEM260-201ENST00000261556 RAB35Q15286 201 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 LINC01551Q86U37 167 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 BPIFA4PQ86YQ2 179 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 SMRP1Q8NCR6 262 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 NOXO1Q8NFA2 376 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 DPF1Q92782 380 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 GPHA2Q96T91 129 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 ATP6V0BQ99437 205 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 SCN5AQ14524 2016 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 PLCE1Q9P212 2302 aa11.28□□□□□ -0.6
TMEM260-201ENST00000261556 ESDP10768 282 aa11.27□□□□□ -0.6
TMEM260-201ENST00000261556 FKBP2P26885 142 aaKnown RBP11.27□□□□□ -0.6
TMEM260-201ENST00000261556 SRPXP78539 464 aa11.27□□□□□ -0.6
TMEM260-201ENST00000261556 FOXC1Q12948 553 aa11.27□□□□□ -0.6
TMEM260-201ENST00000261556 WDYHV1Q96HA8 205 aa11.27□□□□□ -0.6
TMEM260-201ENST00000261556 HILPDAQ9Y5L2 63 aa11.27□□□□□ -0.6
TMEM260-201ENST00000261556 ADAMTSL1Q8N6G6 1762 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 PPBPP02775 128 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 RPL23P62829 140 aaKnown RBP11.27□□□□□ -0.61
TMEM260-201ENST00000261556 Q6ZWC4 215 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 C1orf174Q8IYL3 243 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 TMEM230Q96A57 120 aa11.27□□□□□ -0.61
TMEM260-201ENST00000261556 HDHD3Q9BSH5 251 aaPredicted RBP11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms