RNA–Protein interactions for RNA: ENST00000259008.6

BRIP1-201, Transcript of BRCA1 interacting protein C-terminal helicase 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BRIP1, Length 6,048 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRIP1-201ENST00000259008 C10orf128Q5T292 105 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 PEAR1Q5VY43 1037 aaPredicted RBP5.42□□□□□ -1.54
BRIP1-201ENST00000259008 ACP7Q6ZNF0 438 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 TMUB2Q71RG4 321 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 VKORC1L1Q8N0U8 176 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 LILRB4Q8NHJ6 448 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 IL22RA2Q969J5 263 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 PGLYRP3Q96LB9 341 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 C19orf12Q9NSK7 152 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 KIAA1324LA8MWY0 1029 aaPredicted RBP5.42□□□□□ -1.54
BRIP1-201ENST00000259008 MBP02144 154 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 TRAPPC2P0DI81 140 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 TRAPPC2BP0DI82 140 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 HLA-GP17693 338 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 PSMB6P28072 239 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 KIAA0141Q14154 515 aaPredicted RBP5.42□□□□□ -1.54
BRIP1-201ENST00000259008 OR4X1Q8NH49 305 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 OR4A5Q8NH83 315 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 AP1S3Q96PC3 154 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 ATP5SQ99766 215 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 SLC25A33Q9BSK2 321 aa5.42□□□□□ -1.54
BRIP1-201ENST00000259008 IL18BPO95998 194 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 CD33P20138 364 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 CD200P41217 278 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 MVDP53602 400 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 IL13RA2Q14627 380 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ABLIM2Q6H8Q1 611 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 SLC35E3Q7Z769 313 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 NPAS1Q99742 590 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 REPIN1Q9BWE0 567 aaKnown RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ZNF107Q9UII5 783 aaPredicted RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ST6GALNAC2Q9UJ37 374 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 UFC1Q9Y3C8 167 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 DSPPQ9NZW4 1301 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 FAM24AA6NFZ4 105 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 KRBOX1C9JBD0 128 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ZNF207O43670 478 aaKnown RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 TXNDC12O95881 172 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ENDOGQ14249 297 aaKnown RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 C1QTNF12Q5T7M4 302 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 FAM219AQ8IW50 185 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ZNF645Q8N7E2 425 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ZNF738Q8NE65 137 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 C8orf46Q8TAG6 207 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 DTD1Q8TEA8 209 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ITLN2Q8WWU7 325 aaPredicted RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 GTF3AQ92664 365 aaKnown RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 FAM206AQ9NX38 181 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 V9GYS6 101 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 RP1L1Q8IWN7 2480 aaPredicted RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 CACNA1IQ9P0X4 2223 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 IGHV3OR16-13A0A075B7E8 117 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 IGHV3-74A0A0B4J1X5 117 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ZNF729A6NN14 1252 aaPredicted RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 DHRS7CA6NNS2 312 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 WNT5AP41221 380 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 KIR2DL2P43627 348 aaPredicted RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 MMP15P51511 669 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 SSX1Q16384 188 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 GGNBP1Q5YKI7 109 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 CCDC28AQ8IWP9 274 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 GNPNAT1Q96EK6 184 aaPredicted RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 PKIBQ9C010 78 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 PRSS22Q9GZN4 317 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 WDR81Q562E7 1941 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 PLAUP00749 431 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 HTN3P15516 51 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 PTBP1P26599 531 aaKnown RBP eCLIP5.41□□□□□ -1.542e-8■■■■■ 30.7
BRIP1-201ENST00000259008 EFNB2P52799 333 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 EMP1P54849 157 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 PPP1R1AQ13522 171 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 RBPMSQ93062 196 aaKnown RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 EEF1AKMT3Q96AZ1 226 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ZNF331Q9NQX6 463 aaPredicted RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 PLSCR4Q9NRQ2 329 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 GAR1Q9NY12 217 aaKnown RBP5.41□□□□□ -1.54
BRIP1-201ENST00000259008 SELENOKQ9Y6D0 94 aa5.41□□□□□ -1.54
BRIP1-201ENST00000259008 ASXL3Q9C0F0 2248 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 IGHV3-49A0A0A0MS15 119 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 LOC390937A0A1W2PQ73 354 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 K7EM74 188 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 SFT2D2O95562 160 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 FCGR3AP08637 254 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 SSBP1Q04837 148 aaKnown RBP5.4□□□□□ -1.54
BRIP1-201ENST00000259008 C10orf113Q5VZT2 155 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 VMO1Q7Z5L0 202 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 LINC01356Q8N9X3 169 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 RNF141Q8WVD5 230 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 SMIM4Q8WVI0 70 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 CDC42EP3Q9UKI2 254 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 CA11O75493 328 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 CCL3L1P16619 93 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 RCC1P18754 421 aaPredicted RBP5.4□□□□□ -1.54
BRIP1-201ENST00000259008 FOXG1P55316 489 aaPredicted RBP5.4□□□□□ -1.54
BRIP1-201ENST00000259008 PDPNQ86YL7 162 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 LYSMD2Q8IV50 215 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 OR52M1Q8NGK5 317 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 YIPF5Q969M3 257 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 SOSTQ9BQB4 213 aa5.4□□□□□ -1.54
BRIP1-201ENST00000259008 CLCF1Q9UBD9 225 aa5.4□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms