RNA–Protein interactions for RNA: ENST00000249806.10

CLN6-201, Transcript of CLN6, transmembrane ER protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLN6, Length 2,243 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-201ENST00000249806 KIAA1324LA8MWY0 1029 aaPredicted RBP18.19■□□□□ 0.5
CLN6-201ENST00000249806 GLIPR1P48060 266 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 LRRC29Q8WV35 223 aa18.19■□□□□ 0.5
CLN6-201ENST00000249806 IGKV1-5P01602 117 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 HBZP02008 142 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 WNT2P09544 360 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 IL2RGP31785 369 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 DYNLT3P51808 116 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 MIDNQ504T8 468 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 TIMM23BQ5SRD1 257 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 PRR7Q8TB68 274 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 CACNG5Q9UF02 275 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 CARHSP1Q9Y2V2 147 aaKnown RBP18.18■□□□□ 0.5
CLN6-201ENST00000249806 APC2O95996 2303 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 OOEPA6NGQ2 149 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 H3BP45 60 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 PRH1P02810 166 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 CD5P06127 495 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 CAMLGP49069 296 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 SMIM21Q3B7S5 101 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 SPRNQ5BIV9 151 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 KRBOX4Q5JUW0 171 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 TMEM182Q6ZP80 229 aaPredicted RBP18.18■□□□□ 0.5
CLN6-201ENST00000249806 SEC11CQ9BY50 192 aa18.18■□□□□ 0.5
CLN6-201ENST00000249806 A0A1B0GWJ7 208 aa18.17■□□□□ 0.5
CLN6-201ENST00000249806 TSPAN15O95858 294 aa18.17■□□□□ 0.5
CLN6-201ENST00000249806 ZNF266Q14584 549 aa18.17■□□□□ 0.5
CLN6-201ENST00000249806 VHLLQ6RSH7 139 aa18.17■□□□□ 0.5
CLN6-201ENST00000249806 ZNF295-AS1Q8N0V1 137 aa18.17■□□□□ 0.5
CLN6-201ENST00000249806 CD177Q8N6Q3 437 aa18.17■□□□□ 0.5
CLN6-201ENST00000249806 CRYABP02511 175 aaKnown RBP18.17■□□□□ 0.5
CLN6-201ENST00000249806 EGR1P18146 543 aa18.17■□□□□ 0.5
CLN6-201ENST00000249806 ATP6V0CP27449 155 aa18.17■□□□□ 0.5
CLN6-201ENST00000249806 C22orf34Q6ZV56 151 aa18.17■□□□□ 0.5
CLN6-201ENST00000249806 SPAG16Q8N0X2 631 aa18.17■□□□□ 0.5
CLN6-201ENST00000249806 LIN7CQ9NUP9 197 aaKnown RBP18.17■□□□□ 0.5
CLN6-201ENST00000249806 SFTA3P0C7M3 94 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 SLC25A6P12236 298 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 MMP9P14780 707 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 SSTR5P35346 364 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 TIMP3P35625 211 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 TMEM88Q6PEY1 159 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 C1orf174Q8IYL3 243 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 OR13A1Q8NGR1 328 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 RFESDQ8TAC1 157 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 LSM10Q969L4 123 aaKnown RBP18.16■□□□□ 0.5
CLN6-201ENST00000249806 DCTN5Q9BTE1 182 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 OR2D2Q9H210 308 aa18.16■□□□□ 0.5
CLN6-201ENST00000249806 C5orf30Q96GV9 206 aa18.15■□□□□ 0.5
CLN6-201ENST00000249806 C19orf12Q9NSK7 152 aa18.15■□□□□ 0.5
CLN6-201ENST00000249806 ZGRF1Q86YA3 2104 aa18.15■□□□□ 0.5
CLN6-201ENST00000249806 IFNL4K9M1U5 179 aa18.15■□□□□ 0.5
CLN6-201ENST00000249806 CRYAAP02489 173 aa18.15■□□□□ 0.5
CLN6-201ENST00000249806 PPP1CCP36873 323 aaKnown RBP18.15■□□□□ 0.5
CLN6-201ENST00000249806 SNCAP37840 140 aa18.15■□□□□ 0.5
CLN6-201ENST00000249806 DVL1P1P54792 670 aaPredicted RBP18.15■□□□□ 0.5
CLN6-201ENST00000249806 FAM27E3Q08E93 113 aa18.15■□□□□ 0.5
CLN6-201ENST00000249806 ZNF808Q8N4W9 903 aaPredicted RBP18.15■□□□□ 0.5
CLN6-201ENST00000249806 ZNF645Q8N7E2 425 aa18.15■□□□□ 0.5
CLN6-201ENST00000249806 MUCL1Q96DR8 90 aa18.15■□□□□ 0.5
CLN6-201ENST00000249806 PLCE1Q9P212 2302 aa18.15■□□□□ 0.5
CLN6-201ENST00000249806 IGHV3-43A0A0B4J1X8 118 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 FAM157AC9JC47 383 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 IGHV3-43DP0DP04 118 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 PRDX2P32119 198 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 OR2B11Q5JQS5 317 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 OR2G3Q8NGZ4 309 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 ABHD14AQ9BUJ0 271 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 A0A1B0GV50 99 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 RAMP3O60896 148 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 NPBWR1P48145 328 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 RPL30P62888 115 aaKnown RBP18.14■□□□□ 0.49
CLN6-201ENST00000249806 FGFRL1Q8N441 504 aa18.14■□□□□ 0.49
CLN6-201ENST00000249806 BMP5P22003 454 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 RAB5CP51148 216 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 BAXQ07812 192 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 EDDM3AQ14507 147 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 FAM213BQ8TBF2 198 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 NINJ1Q92982 152 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 OR2V2Q96R30 315 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 LRFN3Q9BTN0 628 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 PIGBOS1A0A0B4J2F0 54 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 DEFB108AA8MXU0 73 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 IGHV3-13P01766 116 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 IAPPP10997 89 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 CD200P41217 278 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 RUNX1Q01196 453 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 TMEM267Q0VDI3 215 aaPredicted RBP18.13■□□□□ 0.49
CLN6-201ENST00000249806 FAM57AQ8TBR7 257 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 ABHD17AQ96GS6 310 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 SCRT1Q9BWW7 348 aa18.13■□□□□ 0.49
CLN6-201ENST00000249806 IGKV1D-17A0A075B6S4 117 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 IGHV3OR15-7A0A075B7D8 119 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 K7N7A8 449 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 TXNL1O43396 289 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 CEACAM8P31997 349 aaPredicted RBP18.12■□□□□ 0.49
CLN6-201ENST00000249806 GLRXP35754 106 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 NKX6-1P78426 367 aaPredicted RBP18.12■□□□□ 0.49
CLN6-201ENST00000249806 MZT1Q08AG7 82 aa18.12■□□□□ 0.49
CLN6-201ENST00000249806 EIF2S3LQ2VIR3 472 aaKnown RBP18.12■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms