RNA–Protein interactions for RNA: ENST00000229829.6

HLA-DOA-201, Transcript of major histocompatibility complex, class II, DO alpha, humanhuman

APPRIS P1 BASIC

Gene HLA-DOA, Length 3,489 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOA-201ENST00000229829 PDGFBP01127 241 aaPredicted RBP8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR10J1P30954 320 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 CEACAM16Q2WEN9 425 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 PLCXD3Q63HM9 321 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 TMEM42Q69YG0 159 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 ASCL4Q6XD76 172 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF573Q86YE8 665 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 ATP5SQ99766 215 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF286AQ9HBT8 521 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 IL36RNQ9UBH0 155 aa8.05□□□□□ -1.12
HLA-DOA-201ENST00000229829 AHCTF1Q8WYP5 2266 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 IGSF23A1L1A6 192 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR6C6A6NF89 314 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 HSPB6O14558 160 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 PPYP01298 95 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 IFNA5P01569 189 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 LMO1P25800 156 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 BRS3P32247 399 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 B3GALT5-AS1P59052 145 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 CXorf66Q5JRM2 361 aaPredicted RBP8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 SPSB3Q6PJ21 355 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 CLEC2AQ6UVW9 174 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 SLC25A26Q70HW3 274 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 SLC35E3Q7Z769 313 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR4D5Q8NGN0 318 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 TMEM171Q8WVE6 324 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 BOD1Q96IK1 185 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 SLC7A10Q9NS82 523 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 C3orf85A0A1B0GTC6 90 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 hCG_38984A0A1B0GV85 526 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF716A6NP11 495 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR5G3P0C626 314 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 CCL2P13500 99 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 TCN2P20062 427 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 CLDN15P56746 228 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 HERV-K104P61576 105 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 RPS18P62269 152 aaKnown RBP8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 TMEM267Q0VDI3 215 aaPredicted RBP8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 HLA-BQ31612 363 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 FAM78BQ5VT40 261 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 C9orf135Q5VTT2 229 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF695Q8IW36 515 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 ATOH7Q8N100 152 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF611Q8N823 705 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 SCGB1C1Q8TD33 95 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 PARD6GQ9BYG4 376 aaPredicted RBP8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 UBE2ZQ9H832 354 aaPredicted RBP8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 CALHM2Q9HA72 323 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 SH2D2AQ9NP31 389 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 RNF150Q9ULK6 438 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF318Q5VUA4 2279 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 A0A087WWC5 75 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 ZNF816-ZNF321PA0A0X1KG74 233 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 RPL36A-HNRNPH2H7BZ11 118 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 MPPED1O15442 326 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 PDCD6O75340 191 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 CBR3O75828 277 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 CXCL12P48061 93 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 RBM11P57052 281 aaKnown RBP8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 RAC3P60763 192 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 RPS16P62249 146 aaKnown RBP8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 MALLQ13021 153 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 IL13RA2Q14627 380 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 AARDQ4LEZ3 155 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 C1orf194Q5T5A4 169 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 IGF2-ASQ6U949 168 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 UNQ5815/PRO19632Q6UWF5 114 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 Q6ZN92 141 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 AAED1Q7RTV5 226 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 GGNQ86UU5 652 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 NAT6Q93015 286 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 FOXB1Q99853 325 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 HSPB9Q9BQS6 159 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR2H1Q9GZK4 316 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 TRAPPC1Q9Y5R8 145 aa8.04□□□□□ -1.12
HLA-DOA-201ENST00000229829 TMEM50AO95807 157 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 SCTP09683 121 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 EGR1P18146 543 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 CCNOP22674 350 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 BSXQ3C1V8 233 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 WIPI1Q5MNZ9 446 aaPredicted RBP8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 BAGE3Q86Y29 109 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 BAGE2Q86Y30 109 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 ODF3L1Q8IXM7 274 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 SNIP1Q8TAD8 396 aaKnown RBP8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 ABHD3Q8WU67 409 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 DUSP23Q9BVJ7 150 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 COL25A1Q9BXS0 654 aaPredicted RBP8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 OR51I2Q9H344 312 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 LOC400499M0QZD8 3231 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 DNAJC13O75165 2243 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 A0A1B0GU03 582 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 HBE1P02100 147 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 HSPB1P04792 205 aaKnown RBP8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 CNN1P51911 297 aaKnown RBP8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 FUT6P51993 359 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 TBC1D26Q86UD7 250 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 IFI44Q8TCB0 444 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 TECTBQ96PL2 329 aa8.03□□□□□ -1.12
HLA-DOA-201ENST00000229829 ALKBH7Q9BT30 221 aaPredicted RBP8.03□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms