RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 GP6Q9HCN6 339 aa12.36□□□□□ -0.43
CNOT3-201ENST00000221232 IGHV3-43A0A0B4J1X8 118 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 RAMP3O60896 148 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 IGHV3-43DP0DP04 118 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 LMO1P25800 156 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 RPS10P46783 165 aaKnown RBP12.35□□□□□ -0.43
CNOT3-201ENST00000221232 UBE2KP61086 200 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 SCGB1C1Q8TD33 95 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 RAB39BQ96DA2 213 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 ICE1Q9Y2F5 2266 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 SYNGR2O43760 224 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 IGHV3-13P01766 116 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 IGHV3-7P01780 117 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 ACAA1P09110 424 aaPredicted RBP12.35□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF806P0C7X5 589 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 BTF3P20290 206 aaKnown RBP12.35□□□□□ -0.43
CNOT3-201ENST00000221232 MEOX2P50222 304 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 RPS23P62266 143 aaKnown RBP12.35□□□□□ -0.43
CNOT3-201ENST00000221232 PRAMEF6Q5VXH4 476 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF429Q86V71 674 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 DRAM1Q8N682 238 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 GNPNAT1Q96EK6 184 aaPredicted RBP12.35□□□□□ -0.43
CNOT3-201ENST00000221232 RPRMQ9NS64 109 aa12.35□□□□□ -0.43
CNOT3-201ENST00000221232 COL27A1Q8IZC6 1860 aaPredicted RBP12.34□□□□□ -0.43
CNOT3-201ENST00000221232 TRBV23-1A0A0A0MS06 115 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 CLEC18AA5D8T8 446 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 KIAA1324LA8MWY0 1029 aaPredicted RBP12.34□□□□□ -0.43
CNOT3-201ENST00000221232 PRSS44E7EML9 344 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 SH2D1BO14796 132 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 CD55P08174 381 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 SRP19P09132 144 aaKnown RBP12.34□□□□□ -0.43
CNOT3-201ENST00000221232 ICAM4Q14773 271 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF497Q6ZNH5 498 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 CLEC18CQ8NCF0 446 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 LFNGQ8NES3 379 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 PKIBQ9C010 78 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 OPA3Q9H6K4 179 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 WSB1Q9Y6I7 421 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 A0A1B0GU03 582 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 G6PCP35575 357 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 TAS2R30P59541 319 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 MRPL49Q13405 166 aaKnown RBP12.34□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF880Q6PDB4 577 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 FGFRL1Q8N441 504 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF561Q8N587 486 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 POM121Q96HA1 1249 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 ZNF665Q9H7R5 613 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 DMXL1Q9Y485 3027 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 ARHGAP21Q5T5U3 1957 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 DOCK11Q5JSL3 2073 aa12.34□□□□□ -0.43
CNOT3-201ENST00000221232 SCAF4O95104 1147 aaKnown RBP12.33□□□□□ -0.44
CNOT3-201ENST00000221232 SELLP14151 372 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 RAB11AP62491 216 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 DLK1P80370 383 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 NCMAPQ5T1S8 102 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 VWA1Q6PCB0 445 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 BEND4Q6ZU67 534 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 KLF14Q8TD94 323 aaPredicted RBP12.33□□□□□ -0.44
CNOT3-201ENST00000221232 MRGPRDQ8TDS7 321 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 SPOCK3Q9BQ16 436 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 LRP5LA4QPB2 252 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 HAND1O96004 215 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 BAXQ07812 192 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 SSX7Q7RTT5 188 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 HAPLN4Q86UW8 402 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 FDCSPQ8NFU4 85 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 RBMXL1Q96E39 390 aaKnown RBP12.33□□□□□ -0.44
CNOT3-201ENST00000221232 DCTN5Q9BTE1 182 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 EGLN1Q9GZT9 426 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 OR2D2Q9H210 308 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 METRNQ9UJH8 293 aa12.33□□□□□ -0.44
CNOT3-201ENST00000221232 RBMXL2O75526 392 aaKnown RBP12.32□□□□□ -0.44
CNOT3-201ENST00000221232 CLDN1O95832 211 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 IL2RGP31785 369 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 GABRA2P47869 451 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 RPL30P62888 115 aaKnown RBP12.32□□□□□ -0.44
CNOT3-201ENST00000221232 TLE4Q04727 773 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 LINC00596Q86U02 117 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 CABLES2Q9BTV7 478 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 POLDIP2Q9Y2S7 368 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 DUXBA0A1W2PPF3 345 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 TGFBR3Q03167 851 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 Q6ZR03 302 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 CLDND2Q8NHS1 167 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 KIAA1456Q9P272 454 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 TNRC6AQ8NDV7 1962 aaKnown RBP12.32□□□□□ -0.44
CNOT3-201ENST00000221232 TRBV6-6A0A0A6YYG2 114 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 UBE2L5PA0A1B0GUS4 154 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 C5orf52A6NGY3 159 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 PGA5P0DJD9 388 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 FOXF2Q12947 444 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 RHEBQ15382 184 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 PLA2G2CQ5R387 149 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 GTF3AQ92664 365 aaKnown RBP12.32□□□□□ -0.44
CNOT3-201ENST00000221232 IL22RA2Q969J5 263 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 OR4C12Q96R67 309 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 RAB40CQ96S21 281 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 CLN8Q9UBY8 286 aa12.32□□□□□ -0.44
CNOT3-201ENST00000221232 CADP27708 2225 aa12.31□□□□□ -0.44
CNOT3-201ENST00000221232 USF3Q68DE3 2245 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms