RNA–Protein interactions for RNA: ENST00000219281.7

USB1-201, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USB1, Length 2,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-201ENST00000219281 C3AR1Q16581 482 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 SPATA46Q5T0L3 261 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 Q6P435 159 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 OR51I2Q9H344 312 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 OPA3Q9H6K4 179 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 ZNF407Q9C0G0 2248 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 SIRPB1O00241 398 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 GFI1BQ5VTD9 330 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 CDPF1Q6NVV7 123 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 LILRB2Q8N423 598 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 OR1K1Q8NGR3 316 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 MBD3L1Q8WWY6 194 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 FAM210BQ96KR6 192 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 OR14J1Q9UGF5 321 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 DMRT1Q9Y5R6 373 aa14.63□□□□□ -0.07
USB1-201ENST00000219281 CACNA1HO95180 2353 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP14.62□□□□□ -0.07
USB1-201ENST00000219281 LRRC75BQ2VPJ9 315 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 ZNF585BQ52M93 769 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 PDZD11Q5EBL8 140 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 OR2B11Q5JQS5 317 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 RCC1LQ96I51 464 aaKnown RBP14.62□□□□□ -0.07
USB1-201ENST00000219281 TTTY12Q9BZ98 90 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 PLA2G3Q9NZ20 509 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 PRSS50Q9UI38 385 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 A0A1W2PR80 420 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 WNT2P09544 360 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 NKX6-1P78426 367 aaPredicted RBP14.62□□□□□ -0.07
USB1-201ENST00000219281 SPANXN5Q5MJ07 72 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 TMEM164Q5U3C3 297 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 ABHD17BQ5VST6 288 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 MYPOPQ86VE0 399 aaPredicted RBP14.62□□□□□ -0.07
USB1-201ENST00000219281 OR10D4PQ8NGN7 298 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 CA5BP1Q8WTZ4 195 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 PSMG3Q9BT73 122 aaPredicted RBP14.62□□□□□ -0.07
USB1-201ENST00000219281 GPR87Q9BY21 358 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 PKIBQ9C010 78 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 TRAPPC2LQ9UL33 140 aa14.62□□□□□ -0.07
USB1-201ENST00000219281 LRP5LA4QPB2 252 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 NPIPB11E5RHQ5 1161 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 WDR1O75083 606 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 SOD3P08294 240 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 TRGC1P0CF51 173 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 MDH2P40926 338 aaKnown RBP14.61□□□□□ -0.07
USB1-201ENST00000219281 ELLP55199 621 aaPredicted RBP14.61□□□□□ -0.07
USB1-201ENST00000219281 C1orf87Q8N0U7 546 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 C12orf49Q9H741 205 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 SDF2L1Q9HCN8 221 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 IL17BQ9UHF5 180 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 MED13Q9UHV7 2174 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 CEBPZOSA8MTT3 80 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 SEC14L6B5MCN3 397 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 J3QT63 122 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 CYB5R3P00387 301 aaPredicted RBP14.61□□□□□ -0.07
USB1-201ENST00000219281 HBG1P69891 147 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 HBG2P69892 147 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 PNRC1Q12796 327 aaPredicted RBP14.61□□□□□ -0.07
USB1-201ENST00000219281 OR1C1Q15619 314 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 MCEMP1Q8IX19 187 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 ZNF383Q8NA42 475 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 OR13D1Q8NGV5 346 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 ABHD5Q8WTS1 349 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 FRZBQ92765 325 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 OR4C12Q96R67 309 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 GPR61Q9BZJ8 451 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 RNF150Q9ULK6 438 aa14.61□□□□□ -0.07
USB1-201ENST00000219281 C21orf140B9A014 251 aa14.6□□□□□ -0.07
USB1-201ENST00000219281 CLDN34H7C241 214 aa14.6□□□□□ -0.07
USB1-201ENST00000219281 PPP1R2P9O14990 202 aa14.6□□□□□ -0.07
USB1-201ENST00000219281 OR2H2O95918 312 aa14.6□□□□□ -0.07
USB1-201ENST00000219281 TMEM41BQ5BJD5 291 aa14.6□□□□□ -0.07
USB1-201ENST00000219281 VASH2Q86V25 355 aa14.6□□□□□ -0.07
USB1-201ENST00000219281 TMEM251Q8N6I4 163 aa14.6□□□□□ -0.07
USB1-201ENST00000219281 WDR61Q9GZS3 305 aaKnown RBP14.6□□□□□ -0.07
USB1-201ENST00000219281 LIN7CQ9NUP9 197 aaKnown RBP14.6□□□□□ -0.07
USB1-201ENST00000219281 PLA2G5P39877 138 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 CEACAM6P40199 344 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 RND2P52198 227 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 SERF2P84101 59 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 PLGLB1Q02325 96 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 CLN3Q13286 438 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 C4orf17Q53FE4 359 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 C9orf152Q5JTZ5 239 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 DCAF10Q5QP82 559 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 HES3Q5TGS1 186 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 ZNF497Q6ZNH5 498 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 LINC00696Q6ZRV3 163 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 BEND4Q6ZU67 534 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 HIST3H2BBQ8N257 126 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 SSX3Q99909 188 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 TMEM9BQ9NQ34 198 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 IGHV3-64DA0A0J9YX35 117 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 MAP1LC3B2A6NCE7 125 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 HNF4GQ14541 408 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 WDR86Q86TI4 376 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 P2RX4Q99571 388 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 MAP1LC3BQ9GZQ8 125 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 TMEM242Q9NWH2 141 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 VAX2Q9UIW0 290 aa14.59□□□□□ -0.07
USB1-201ENST00000219281 UBE2L5PA0A1B0GUS4 154 aa14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 52.8 ms