RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 UBALD1Q8TB05 177 aa10.89□□□□□ -0.67
PHGDH-221ENST00000641573 NEU4Q8WWR8 484 aaPredicted RBP10.89□□□□□ -0.67
PHGDH-221ENST00000641573 IL1F10Q8WWZ1 152 aa10.89□□□□□ -0.67
PHGDH-221ENST00000641573 TOMM40LQ969M1 308 aa10.89□□□□□ -0.67
PHGDH-221ENST00000641573 TMEM230Q96A57 120 aa10.89□□□□□ -0.67
PHGDH-221ENST00000641573 DCTN5Q9BTE1 182 aa10.89□□□□□ -0.67
PHGDH-221ENST00000641573 DNTTIP1Q9H147 329 aa10.89□□□□□ -0.67
PHGDH-221ENST00000641573 OR1A1Q9P1Q5 309 aa10.89□□□□□ -0.67
PHGDH-221ENST00000641573 LAMP3Q9UQV4 416 aa10.89□□□□□ -0.67
PHGDH-221ENST00000641573 VPS13CQ709C8 3753 aa10.89□□□□□ -0.67
PHGDH-221ENST00000641573 FBN1P35555 2871 aaKnown RBP10.88□□□□□ -0.67
PHGDH-221ENST00000641573 C9orf170A2RU37 121 aa10.88□□□□□ -0.67
PHGDH-221ENST00000641573 TNFRSF13BO14836 293 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-221ENST00000641573 LY6G6DO95868 133 aa10.88□□□□□ -0.67
PHGDH-221ENST00000641573 HLA-AP01891 365 aaKnown RBP10.88□□□□□ -0.67
PHGDH-221ENST00000641573 HBZP02008 142 aa10.88□□□□□ -0.67
PHGDH-221ENST00000641573 ERP29P30040 261 aaKnown RBP10.88□□□□□ -0.67
PHGDH-221ENST00000641573 EDDM3BP56851 147 aa10.88□□□□□ -0.67
PHGDH-221ENST00000641573 TMEM128Q5BJH2 165 aa10.88□□□□□ -0.67
PHGDH-221ENST00000641573 TRAT1Q6PIZ9 186 aa10.88□□□□□ -0.67
PHGDH-221ENST00000641573 SLC38A6Q8IZM9 456 aa10.88□□□□□ -0.67
PHGDH-221ENST00000641573 C12orf45Q8N5I9 185 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-221ENST00000641573 NCOR1P1Q9H4R4 102 aa10.88□□□□□ -0.67
PHGDH-221ENST00000641573 RANGRFQ9HD47 186 aaPredicted RBP10.88□□□□□ -0.67
PHGDH-221ENST00000641573 MGAT4CQ9UBM8 478 aa10.88□□□□□ -0.67
PHGDH-221ENST00000641573 TMPRSS2O15393 492 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 ADAM20O43506 726 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 RP2O75695 350 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 SFT2D2O95562 160 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 CXCL3P19876 107 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 VAMP1P23763 118 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 CD34P28906 385 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 IL2RGP31785 369 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 KCNJ8Q15842 424 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 ABCA11PQ4W5N1 156 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 SPICQ8N5J4 248 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 ZNF565Q8N9K5 539 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 UXS1Q8NBZ7 420 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 OR2AK2Q8NG84 335 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 CASTOR1Q8WTX7 329 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 ARL11Q969Q4 196 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 GALMQ96C23 342 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 DMRTB1Q96MA1 342 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 FYTTD1Q96QD9 318 aaKnown RBP10.87□□□□□ -0.67
PHGDH-221ENST00000641573 TMEM246Q9BRR3 403 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 RSRP1Q9BUV0 290 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 OR2W1Q9Y3N9 320 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 ROS1P08922 2347 aa10.87□□□□□ -0.67
PHGDH-221ENST00000641573 TANC2Q9HCD6 1990 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 MXRA5Q9NR99 2828 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 IGKV1D-13A0A0B4J2D9 117 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 MEX3AA1L020 520 aaKnown RBP10.86□□□□□ -0.67
PHGDH-221ENST00000641573 C15orf65H3BRN8 121 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 SPINT2O43291 252 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 HSPA12AO43301 675 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 NDUFA2O43678 99 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 IGKV1-13P0DP09 117 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 GZMHP20718 246 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 SSTR5P35346 364 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 MRPS11P82912 194 aaKnown RBP10.86□□□□□ -0.67
PHGDH-221ENST00000641573 CR1LQ2VPA4 569 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 LPCAT3Q6P1A2 487 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 LYPD2Q6UXB3 125 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 TCTE3Q8IZS6 198 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 FGFRL1Q8N441 504 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 OR52L2PQ8NGH6 319 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 SECTM1Q8WVN6 248 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 ZNF486Q96H40 463 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-221ENST00000641573 SLC5A7Q9GZV3 580 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 RDH8Q9NYR8 311 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 OR6C3Q9NZP0 311 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 SLC25A10Q9UBX3 287 aaPredicted RBP10.86□□□□□ -0.67
PHGDH-221ENST00000641573 OPN4Q9UHM6 478 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 HIVEP2P31629 2446 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 ARFGEF3Q5TH69 2177 aa10.86□□□□□ -0.67
PHGDH-221ENST00000641573 CRYM-AS1A6NIL9 109 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 NDUFB3O43676 98 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 LY6HO94772 140 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 DUS4LO95620 317 aaKnown RBP10.85□□□□□ -0.67
PHGDH-221ENST00000641573 FSTL3O95633 263 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 ANXA3P12429 323 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 DAOP14920 347 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 RPS2P15880 293 aaKnown RBP10.85□□□□□ -0.67
PHGDH-221ENST00000641573 NDUFB7P17568 137 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 CDKN1AP38936 164 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 CEACAM6P40199 344 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 PIGPP57054 158 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 SUPT4H1P63272 117 aaKnown RBP10.85□□□□□ -0.67
PHGDH-221ENST00000641573 SLC9A3R2Q15599 337 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 C2orf68Q2NKX9 166 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 PHLDA2Q53GA4 152 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 SGPP2Q8IWX5 399 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 CCDC71LQ8N9Z2 235 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 OR10V1Q8NGI7 309 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 RFESDQ8TAC1 157 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 MITD1Q8WV92 249 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 PHB2Q99623 299 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 ZNF436Q9C0F3 470 aaPredicted RBP10.85□□□□□ -0.67
PHGDH-221ENST00000641573 CCL28Q9NRJ3 127 aa10.85□□□□□ -0.67
PHGDH-221ENST00000641573 KAAG1Q9UBP8 84 aa10.85□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms