RNA–Protein interactions for RNA: ENST00000641491.1

PHGDH-218, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 986 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-218ENST00000641491 HRH1P35367 487 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 SRP14P37108 136 aaKnown RBP10.66□□□□□ -0.7
PHGDH-218ENST00000641491 CEACAM6P40199 344 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 GNG10P50151 68 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 RAB7AP51149 207 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 ARHGDIBP52566 201 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 HTD2P86397 168 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 LSAMPQ13449 338 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 ZNF880Q6PDB4 577 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 Q6ZS49 121 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 C1orf122Q6ZSJ8 110 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 TMEM229BQ8NBD8 167 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 ZNF596Q8TC21 504 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 CREB3L1Q96BA8 519 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 TMEM133Q9H2Q1 129 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 GSX1Q9H4S2 264 aaPredicted RBP10.66□□□□□ -0.7
PHGDH-218ENST00000641491 MMP26Q9NRE1 261 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 KLK11Q9UBX7 282 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 SCP2D1Q9UJQ7 156 aa10.66□□□□□ -0.7
PHGDH-218ENST00000641491 IGHV3-43A0A0B4J1X8 118 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 LINC00854A0A1B0GVQ3 168 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 C17orf98A8MV24 154 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 CD5LO43866 347 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 SCTP09683 121 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 OR5H8P0DN80 308 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 IGHV3-43DP0DP04 118 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 FOSL1P15407 271 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 ZNF79Q15937 498 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 SCGB2B2Q4G0G5 96 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 STEAP1BQ6NZ63 245 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 MZT2BQ6NZ67 158 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 MFSD4AQ8N468 514 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 OR52M1Q8NGK5 317 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 OR6F1Q8NGZ6 308 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 DEDD2Q8WXF8 326 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 LHX4Q969G2 390 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 BORCS5Q969J3 196 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 CLEC7AQ9BXN2 247 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 GFOD1Q9NXC2 390 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 CSPG4Q6UVK1 2322 aa10.65□□□□□ -0.7
PHGDH-218ENST00000641491 JMJD1CQ15652 2540 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 F2RL2O00254 374 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 CD3DP04234 171 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 AMY2AP04746 511 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 ARG1P05089 322 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 PRTN3P24158 256 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 CEACAM3P40198 252 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 C17orf58Q2M2W7 97 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 CR1LQ2VPA4 569 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 CLEC9AQ6UXN8 241 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 ABHD12Q8N2K0 398 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 CIARTQ8N365 385 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-218ENST00000641491 PNKDQ8N490 385 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 OR52L2PQ8NGH6 319 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 OR9G1Q8NH87 305 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 NANPQ8TBE9 248 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 PRRT1Q99946 306 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 SOSTQ9BQB4 213 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 C7orf50Q9BRJ6 194 aaKnown RBP10.64□□□□□ -0.71
PHGDH-218ENST00000641491 CABLES2Q9BTV7 478 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 ABHD14AQ9BUJ0 271 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 ZNF221Q9UK13 617 aa10.64□□□□□ -0.71
PHGDH-218ENST00000641491 MAP1AP78559 2803 aaPredicted RBP10.64□□□□□ -0.71
PHGDH-218ENST00000641491 TRAV40A0A0B4J280 105 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 NAP1L6A6NFF2 107 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 A8MV72 311 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-218ENST00000641491 C15orf65H3BRN8 121 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 J3QRK9 145 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 M0QYG6 137 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 IL7P13232 177 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 PGAM2P15259 253 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 PPP1CCP36873 323 aaKnown RBP10.63□□□□□ -0.71
PHGDH-218ENST00000641491 ECI1P42126 302 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 LUMP51884 338 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-218ENST00000641491 PAX8Q06710 450 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 Q3ZCU0 254 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 IGSF11Q5DX21 431 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 TCF23Q7RTU1 214 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 PDZD9Q8IXQ8 264 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 ARRDC1Q8N5I2 433 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 FAM216AQ8WUB2 273 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 TNFRSF14Q92956 283 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 SNAPC3Q92966 411 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 SCGB3A2Q96PL1 93 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 ZNF2Q9BSG1 426 aaPredicted RBP10.63□□□□□ -0.71
PHGDH-218ENST00000641491 RDH8Q9NYR8 311 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 FAM96BQ9Y3D0 163 aa10.63□□□□□ -0.71
PHGDH-218ENST00000641491 IGHV2-26A0A0B4J1V2 119 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 ANKRD20A5PA0PJZ0 165 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 NPIPB11E5RHQ5 1161 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 YPEL1O60688 119 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 FCN3O75636 299 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 SLC22A5O76082 557 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 NAT1P18440 290 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 NFYAP23511 347 aaPredicted RBP10.62□□□□□ -0.71
PHGDH-218ENST00000641491 FCGR2CP31995 323 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 GPR12P47775 334 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 FXYD4P59646 89 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 ABCA11PQ4W5N1 156 aa10.62□□□□□ -0.71
PHGDH-218ENST00000641491 VAX1Q5SQQ9 334 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms