RNA–Protein interactions for RNA: ENST00000638889.1

CCDC7-211, Transcript of coiled-coil domain containing 7, humanhuman

TSL 3

Gene CCDC7, Length 423 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-211ENST00000638889 HBMQ6B0K9 141 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 FAHD1Q6P587 224 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 RASL11AQ6T310 242 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 OR4A15Q8NGL6 344 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 OR2AE1Q8NHA4 323 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 LHFPL5Q8TAF8 219 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 AGR3Q8TD06 166 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 SLC35G5Q96KT7 338 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 TBX5Q99593 518 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 CIB1Q99828 191 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 EBNA1BP2Q99848 306 aaKnown RBP0.39□□□□□ -2.35
CCDC7-211ENST00000638889 MND1Q9BWT6 205 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 C11orf1Q9H5F2 150 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 SCML1Q9UN30 329 aa0.39□□□□□ -2.35
CCDC7-211ENST00000638889 ZNF532Q9HCE3 1301 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 ZNF705FA8MVS1 300 aaPredicted RBP0.38□□□□□ -2.35
CCDC7-211ENST00000638889 H0YIV9 168 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 BOLA2-SMG1P6H3BVE0 249 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 PSMD11O00231 422 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 UBFD1O14562 309 aaKnown RBP0.38□□□□□ -2.35
CCDC7-211ENST00000638889 FBP1P09467 338 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 GIMD1P0DJR0 217 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 SLC35A2P78381 396 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 RELAQ04206 551 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 ZNF791Q3KP31 576 aaPredicted RBP0.38□□□□□ -2.35
CCDC7-211ENST00000638889 UNQ6190/PRO20217Q6UXQ8 127 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 OR52K2Q8NGK3 314 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 DTD1Q8TEA8 209 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 FAAP24Q9BTP7 215 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 GAL3ST2Q9H3Q3 398 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 HAUS4Q9H6D7 363 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 DDX18Q9NVP1 670 aaKnown RBP0.38□□□□□ -2.35
CCDC7-211ENST00000638889 SLX4Q8IY92 1834 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 CLUHO75153 1309 aa0.38□□□□□ -2.35
CCDC7-211ENST00000638889 ROS1P08922 2347 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 MYO5BQ9ULV0 1848 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 TMEM235A6NFC5 223 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 C2orf74A8MZ97 194 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 C9J4A7 227 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 UBDO15205 165 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 KDELR3O43731 214 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 SC5DO75845 299 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 SNAI1O95863 264 aaPredicted RBP0.37□□□□□ -2.35
CCDC7-211ENST00000638889 ESDP10768 282 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 GABARAPL2P60520 117 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 C1QTNF8P60827 252 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 ERHP84090 104 aaKnown RBP0.37□□□□□ -2.35
CCDC7-211ENST00000638889 PLCXD2Q0VAA5 305 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 ASCC1Q8N9N2 400 aaKnown RBP0.37□□□□□ -2.35
CCDC7-211ENST00000638889 CDCA4Q9BXL8 241 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 PSME2Q9UL46 239 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 FIS1Q9Y3D6 152 aa0.37□□□□□ -2.35
CCDC7-211ENST00000638889 IGKV3-7A0A075B6H7 116 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 TMSB15BA0A087X1C1 80 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 EPPINO95925 133 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 DNASE1L1P49184 302 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 PDK2Q15119 407 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 TRIP13Q15645 432 aaPredicted RBP0.36□□□□□ -2.35
CCDC7-211ENST00000638889 MAPK14Q16539 360 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 PSG3Q16557 428 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 HSP90AA4PQ58FG1 418 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 CHCHD2P9Q5T1J5 151 aaPredicted RBP0.36□□□□□ -2.35
CCDC7-211ENST00000638889 PID1Q7Z2X4 250 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 ZBTB8OSQ8IWT0 167 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 SYS1Q8N2H4 156 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 OR5D18Q8NGL1 313 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 ASB17Q8WXJ9 295 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 FGF13Q92913 245 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 STMN3Q9NZ72 180 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 DLG5Q8TDM6 1919 aa0.36□□□□□ -2.35
CCDC7-211ENST00000638889 TRBV6-5A0A0K0K1A5 114 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 SHOX2O60902 331 aaPredicted RBP0.35□□□□□ -2.35
CCDC7-211ENST00000638889 VAPBO95292 243 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 C1QCP02747 245 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 CRYGCP07315 174 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 BGNP21810 368 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 CRHBPP24387 322 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 RPA3P35244 121 aaPredicted RBP0.35□□□□□ -2.35
CCDC7-211ENST00000638889 DEKP35659 375 aaKnown RBP0.35□□□□□ -2.35
CCDC7-211ENST00000638889 PPP1CCP36873 323 aaKnown RBP0.35□□□□□ -2.35
CCDC7-211ENST00000638889 RANBP1P43487 201 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 IDH3GP51553 393 aaPredicted RBP0.35□□□□□ -2.35
CCDC7-211ENST00000638889 ATP5J2P56134 94 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 TSPEAR-AS2P59090 65 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 SLC38A11Q08AI6 406 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 PAFAH1B3Q15102 231 aaKnown RBP0.35□□□□□ -2.35
CCDC7-211ENST00000638889 TRAM1Q15629 374 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 Q6ZT83 130 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 LRRC28Q86X40 367 aaPredicted RBP0.35□□□□□ -2.35
CCDC7-211ENST00000638889 YIPF7Q8N8F6 280 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 ANGPTL6Q8NI99 470 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 PGLYRP3Q96LB9 341 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 MYCBPQ99417 103 aaPredicted RBP0.35□□□□□ -2.35
CCDC7-211ENST00000638889 RMND1Q9NWS8 449 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 ALG5Q9Y673 324 aa0.35□□□□□ -2.35
CCDC7-211ENST00000638889 DNMT1P26358 1616 aaKnown RBP0.35□□□□□ -2.35
CCDC7-211ENST00000638889 RAB3GAP2Q9H2M9 1393 aa0.34□□□□□ -2.35
CCDC7-211ENST00000638889 TRAV41A0A0B4J266 112 aa0.34□□□□□ -2.36
CCDC7-211ENST00000638889 GOLGA6L7A0A1B0GV03 622 aa0.34□□□□□ -2.36
CCDC7-211ENST00000638889 GRIFINA4D1Z8 144 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 75 ms