RNA–Protein interactions for RNA: ENST00000638011.1

UBE3A-227, Transcript of ubiquitin protein ligase E3A, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene UBE3A, Length 8,742 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3A-227ENST00000638011 VSIG4Q9Y279 399 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 PRDX2P32119 198 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 ZNF124Q15973 351 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 OR1L8Q8NGR8 309 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 OR10AC1Q8NH08 325 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 PAXXQ9BUH6 204 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 LINC01553A4QN01 128 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 PAGE4O60829 102 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 ROM1Q03395 351 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 LRRC75BQ2VPJ9 315 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 OR2K2Q8NGT1 345 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 GPR27Q9NS67 375 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 IDSB3KWA1 339 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 CTSVO60911 334 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 SS18L1O75177 396 aaPredicted RBP13.34□□□□□ -0.27
UBE3A-227ENST00000638011 OR4D9Q8NGE8 314 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 LINC00615Q96LM1 132 aaPredicted RBP13.34□□□□□ -0.27
UBE3A-227ENST00000638011 HSF4Q9ULV5 492 aa13.34□□□□□ -0.27
UBE3A-227ENST00000638011 TMEM50AO95807 157 aa13.33□□□□□ -0.27
UBE3A-227ENST00000638011 TRGC1P0CF51 173 aa13.33□□□□□ -0.27
UBE3A-227ENST00000638011 DDX60LQ5H9U9 1706 aaKnown RBP13.33□□□□□ -0.27
UBE3A-227ENST00000638011 DHHO43323 396 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 LSM6P62312 80 aaKnown RBP13.33□□□□□ -0.28
UBE3A-227ENST00000638011 PRSS36Q5K4E3 855 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 C5orf30Q96GV9 206 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 AQP10Q96PS8 301 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 NRG2O14511 850 aaPredicted RBP13.33□□□□□ -0.28
UBE3A-227ENST00000638011 HKR1P10072 659 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 ORAI1Q96D31 301 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 GEMIN7Q9H840 131 aaKnown RBP13.33□□□□□ -0.28
UBE3A-227ENST00000638011 A0A087WWC5 75 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 K7EQS6 105 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 UPK1AO00322 258 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 GZMHP20718 246 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 CA7P43166 264 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 ZNF841Q6ZN19 808 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 SPG11Q96JI7 2443 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 NT5CQ8TCD5 201 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 SRSF4Q08170 494 aaKnown RBP13.33□□□□□ -0.28
UBE3A-227ENST00000638011 OR4C3Q8NH37 302 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 ZNF764Q96H86 408 aaPredicted RBP13.33□□□□□ -0.28
UBE3A-227ENST00000638011 TCFL5Q9UL49 500 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 PHLDA3Q9Y5J5 127 aa13.33□□□□□ -0.28
UBE3A-227ENST00000638011 FCGR3AP08637 254 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 ZNF117Q03924 483 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 STRCQ7RTU9 1775 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 LDLRAD3Q86YD5 345 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 MRGPRX1Q96LB2 322 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 MGPP08493 103 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 PRSS8Q16651 343 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 TRPM3Q9HCF6 1732 aaPredicted RBP13.32□□□□□ -0.28
UBE3A-227ENST00000638011 LOC390937A0A1W2PQ73 354 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 CD1AP06126 327 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 HMGCLL1Q8TB92 370 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 ONECUT1Q9UBC0 465 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 A0A0A6YYD5 115 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 PTPRQQ9UMZ3 2332 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 H0Y980 276 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 SPRY1O43609 319 aaPredicted RBP13.32□□□□□ -0.28
UBE3A-227ENST00000638011 HIST1H1AQ02539 215 aaPredicted RBP13.32□□□□□ -0.28
UBE3A-227ENST00000638011 LINC00614P0C842 121 aa13.32□□□□□ -0.28
UBE3A-227ENST00000638011 TMEM131Q92545 1883 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 ATP6V0CP27449 155 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 RPS4XP62701 263 aaKnown RBP13.31□□□□□ -0.28
UBE3A-227ENST00000638011 OR4X1Q8NH49 305 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 ZNF296Q8WUU4 475 aaPredicted RBP13.31□□□□□ -0.28
UBE3A-227ENST00000638011 SCNM1Q9BWG6 230 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 WNT5BQ9H1J7 359 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 KBTBD11-OT1A0A1B0GTJ5 212 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 LOC389332A0A1B0GUA5 103 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 TMEM189A5PLL7 270 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 OR2Z1Q8NG97 314 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 ELOVL5Q9NYP7 299 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 TMEM78Q5T7P6 136 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 HIGD1AQ9Y241 93 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 IGF2P01344 180 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 MNX1P50219 401 aaPredicted RBP13.31□□□□□ -0.28
UBE3A-227ENST00000638011 CTAG1AP78358 180 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 SKP2Q13309 424 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 Q6AWC8 147 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 MRGPRX3Q96LB0 322 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 HELZP42694 1942 aaKnown RBP13.31□□□□□ -0.28
UBE3A-227ENST00000638011 PCBP3P57721 371 aaKnown RBP13.31□□□□□ -0.28
UBE3A-227ENST00000638011 WSB2Q9NYS7 404 aaPredicted RBP13.31□□□□□ -0.28
UBE3A-227ENST00000638011 FLYWCH2Q96CP2 140 aaKnown RBP13.31□□□□□ -0.28
UBE3A-227ENST00000638011 LTBP3Q9NS15 1303 aa13.31□□□□□ -0.28
UBE3A-227ENST00000638011 LINC00869P0C866 280 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 SEC11AP67812 179 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 HBBP68871 147 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 PAAF1Q9BRP4 392 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 KCPQ6ZWJ8 1503 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 OR3A4PP47883 348 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 ZNF430Q9H8G1 570 aaPredicted RBP13.3□□□□□ -0.28
UBE3A-227ENST00000638011 TRPM7Q96QT4 1865 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 SORL1Q92673 2214 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 OGG1O15527 345 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 GCM2O75603 506 aaPredicted RBP13.3□□□□□ -0.28
UBE3A-227ENST00000638011 FAM157BP0CG42 384 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 HSPB7Q9UBY9 170 aa13.3□□□□□ -0.28
UBE3A-227ENST00000638011 TAF1LQ8IZX4 1826 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms