RNA–Protein interactions for RNA: ENST00000638009.1

CACNA1A-257, Transcript of calcium voltage-gated channel subunit alpha1 A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CACNA1A, Length 8,665 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1A-257ENST00000638009 ABHD3Q8WU67 409 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 C19orf24Q9BVV8 132 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 HSPB7Q9UBY9 170 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 A1L4Q6 167 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 OR11H12B2RN74 326 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 MC5RP33032 325 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 ASIPP42127 132 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 HIST1H1AQ02539 215 aaPredicted RBP17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 IL11RAQ14626 422 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 OR11H1Q8NG94 326 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 OR11H2Q8NH07 326 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 A0A1W2PR48 441 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 C7orf66A4D0T2 115 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 GABRG2P18507 467 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 C2orf83Q53S99 150 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 TMEM210A6NLX4 147 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 SCD5Q86SK9 330 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 ANAPC13Q9BS18 74 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 ABHD14AQ9BUJ0 271 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 PCOLCE2Q9UKZ9 415 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 ZDHHC8Q9ULC8 765 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 RIF1Q5UIP0 2472 aaKnown RBP17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 A0A1W2PNR3 127 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 CDK2AP2O75956 126 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 CLLU1OSQ5K130 101 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 TMEM45BQ96B21 275 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 HEXA-AS1Q9H8Q6 139 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 SPCS1Q9Y6A9 102 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 TMEM52BQ4KMG9 183 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 NEU3Q9UQ49 428 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 NRAPQ86VF7 1730 aa17.1■□□□□ 0.33
CACNA1A-257ENST00000638009 CCL17Q92583 94 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 ABHD14BQ96IU4 210 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 DMRTA2Q96SC8 542 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 SLC25A35Q3KQZ1 300 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 ALG1L2C9J202 215 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 HYPMO75409 117 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 GCSAMLQ5JQS6 135 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 ZNF384Q8TF68 577 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 FOXB1Q99853 325 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 FAM78AQ5JUQ0 283 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 GPR27Q9NS67 375 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 MTCH2Q9Y6C9 303 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 RPS4XP62701 263 aaKnown RBP17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 MEF2BQ02080 365 aaPredicted RBP17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 SAPCD1Q5SSQ6 148 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 OR13C6PQ8NH95 151 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 MMP17Q9ULZ9 603 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 DNASE2BQ8WZ79 361 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 PAAF1Q9BRP4 392 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 GPR35Q9HC97 309 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 NPVFQ9HCQ7 196 aa17.09■□□□□ 0.33
CACNA1A-257ENST00000638009 CAPZBP47756 277 aa17.08■□□□□ 0.33
CACNA1A-257ENST00000638009 NAAAQ02083 359 aa17.08■□□□□ 0.33
CACNA1A-257ENST00000638009 ISOC2Q96AB3 205 aa17.08■□□□□ 0.33
CACNA1A-257ENST00000638009 IGHV3-64DA0A0J9YX35 117 aa17.08■□□□□ 0.33
CACNA1A-257ENST00000638009 OR6X1Q8NH79 312 aa17.08■□□□□ 0.33
CACNA1A-257ENST00000638009 OR1P1Q8NH06 330 aa17.08■□□□□ 0.32
CACNA1A-257ENST00000638009 SLIRPQ9GZT3 109 aaKnown RBP17.08■□□□□ 0.32
CACNA1A-257ENST00000638009 MT-CO3P00414 261 aa17.08■□□□□ 0.32
CACNA1A-257ENST00000638009 TMEM174Q8WUU8 243 aa17.08■□□□□ 0.32
CACNA1A-257ENST00000638009 MED29Q9NX70 200 aa17.08■□□□□ 0.32
CACNA1A-257ENST00000638009 ATP5LO75964 103 aa17.08■□□□□ 0.32
CACNA1A-257ENST00000638009 CGB2Q6NT52 195 aa17.08■□□□□ 0.32
CACNA1A-257ENST00000638009 CA6P23280 308 aa17.08■□□□□ 0.32
CACNA1A-257ENST00000638009 ALKBH6Q3KRA9 238 aa17.08■□□□□ 0.32
CACNA1A-257ENST00000638009 ZNF414Q96IQ9 312 aa17.08■□□□□ 0.32
CACNA1A-257ENST00000638009 SRD5A2P31213 254 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 FAM209BQ5JX69 171 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 ADAMTS5Q9UNA0 930 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 SYNGR1O43759 233 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 C4orf45Q96LM5 186 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 ELF5Q9UKW6 265 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 OTOGLQ3ZCN5 2332 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 SSMEM1Q8WWF3 244 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 DMRT1Q9Y5R6 373 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 HOXA3O43365 443 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 SNRPD3P62318 126 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 MRPS11P82912 194 aaKnown RBP17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 NRSN2Q9GZP1 204 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 TMEM50AO95807 157 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 CNTFRP26992 372 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 PQLC2Q6ZP29 291 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 SPRED3Q2MJR0 410 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 ZNF324BQ6AW86 544 aaPredicted RBP17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 OR4D5Q8NGN0 318 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 SARGQ9BW04 601 aa17.07■□□□□ 0.32
CACNA1A-257ENST00000638009 ZNF385CQ66K41 422 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 TOX2Q96NM4 488 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 PTPRFP10586 1907 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 FBXO46Q6PJ61 603 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 OR5M9Q8NGP3 310 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 GJB3O75712 270 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 GNRHR2Q96P88 292 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 ZNF275Q9NSD4 429 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 BEX4Q9NWD9 120 aaPredicted RBP17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 LTBP3Q9NS15 1303 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 ARID2Q68CP9 1835 aa17.06■□□□□ 0.32
CACNA1A-257ENST00000638009 ZNF770Q6IQ21 691 aaPredicted RBP17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms