RNA–Protein interactions for RNA: ENST00000637657.1

PCCA-215, Transcript of propionyl-CoA carboxylase subunit alpha, human

TSL 5

Gene PCCA, Length 2,118 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCCA-215	ENST00000637657	LHX2	P50458	406 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	HIST3H3	Q16695	136 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	OR10J3	Q5JRS4	329 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	C19orf35	Q6ZS72	473 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	PNPLA5	Q7Z6Z6	429 aa	Predicted RBP	11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	PRR22	Q8IZ63	422 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	RPP25L	Q8N5L8	163 aa	Known RBP	11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	SPTSSA	Q969W0	71 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	APH1A	Q96BI3	265 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	CYYR1	Q96J86	154 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	VPS25	Q9BRG1	176 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	FAM60A	Q9NP50	221 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	KCNIP2	Q9NS61	270 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	SLC7A10	Q9NS82	523 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	LOC105371242	A0A075B767	164 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	NUPR1	O60356	82 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	HYPM	O75409	117 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	TUSC2	O75896	110 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	IL11	P20809	199 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	ARF6	P62330	175 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	YPEL5	P62699	121 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	TMEM267	Q0VDI3	215 aa	Predicted RBP	11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	TDRG1	Q3Y452	100 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	SGMS2	Q8NHU3	365 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	BORCS8	Q96FH0	119 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	SFRP2	Q96HF1	295 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	MRGPRX1	Q96LB2	322 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	OBP2A	Q9NY56	170 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	MRPL27	Q9P0M9	148 aa	Known RBP	11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	ZNF581	Q9P0T4	197 aa		11.2	□□□□□ -0.62
PCCA-215	ENST00000637657	LOC102725191	A0A1B0GVB3	256 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	CCDC85C	A6NKD9	419 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	KIAA1324L	A8MWY0	1029 aa	Predicted RBP	11.19	□□□□□ -0.62
PCCA-215	ENST00000637657		K7ERU9	68 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	AQP7	O14520	342 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	KITLG	P21583	273 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	MSR1	P21757	451 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	F2R	P25116	425 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	FKBP2	P26885	142 aa	Known RBP	11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	RPS18	P62269	152 aa	Known RBP	11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	RHOG	P84095	191 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	DLX2	Q07687	328 aa	Predicted RBP	11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	DEFB110	Q30KQ9	67 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	LHX8	Q68G74	356 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	ZNF818P	Q6ZRF7	136 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	RD3	Q7Z3Z2	195 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	GAPT	Q8N292	157 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	OR1L6	Q8NGR2	347 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	LIN37	Q96GY3	246 aa	Predicted RBP	11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	CSTL1	Q9H114	145 aa		11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	UBE2Z	Q9H832	354 aa	Predicted RBP	11.19	□□□□□ -0.62
PCCA-215	ENST00000637657	C17orf112	F2Z3M2	114 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	SLC31A1	O15431	190 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	OR2J2	O76002	312 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	TOX4	O94842	621 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	SERPINE2	P07093	398 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	GPX1	P07203	203 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	CDKN1A	P38936	164 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	TESK1	Q15569	626 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	CLEC12B	Q2HXU8	276 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	WDR73	Q6P4I2	378 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	CCL4L1	Q8NHW4	92 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	EMC6	Q9BV81	110 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	ZNF442	Q9H7R0	627 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	LANCL2	Q9NS86	450 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	THADA	Q6YHU6	1953 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	IGKV3D-11	A0A0A0MRZ8	115 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	IGHV2-26	A0A0B4J1V2	119 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	CD300LB	A8K4G0	201 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	C11orf94	C9JXX5	98 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	ARR3	P36575	388 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	FBXO46	Q6PJ61	603 aa	Predicted RBP	11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	MCEMP1	Q8IX19	187 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	ZNF321P	Q8N8H1	164 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	TUBG2	Q9NRH3	451 aa		11.18	□□□□□ -0.62
PCCA-215	ENST00000637657	SIRPB1	O00241	398 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	TSPO	P30536	169 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	GABRA2	P47869	451 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	RBM11	P57052	281 aa	Known RBP	11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	MFAP5	Q13361	173 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	C2orf27A	Q580R0	203 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	SLC25A53	Q5H9E4	307 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	ZNF468	Q5VIY5	522 aa	Predicted RBP	11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	WDFY1	Q8IWB7	410 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	ZNF295-AS1	Q8N0V1	137 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	OR2M7	Q8NG81	312 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	OR10G9	Q8NGN4	311 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	OR10G7	Q8NGN6	311 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	RAB1C	Q92928	201 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	TSACC	Q96A04	125 aa	Predicted RBP	11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	OXGR1	Q96P68	337 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	GNB1L	Q9BYB4	327 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	MRPL18	Q9H0U6	180 aa	Known RBP	11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	TP53TG3	Q9ULZ0	132 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	SLC22A20	A6NK97	555 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657		M0R135	149 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	TRAF3IP2	O43734	574 aa	Predicted RBP	11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	SLC38A11	Q08AI6	406 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	RNF151	Q2KHN1	245 aa		11.17	□□□□□ -0.62
PCCA-215	ENST00000637657	FOXL2NB	Q6ZUU3	175 aa		11.17	□□□□□ -0.62

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