RNA–Protein interactions for RNA: ENST00000636554.1

THUMPD1-206, Transcript of THUMP domain containing 1, humanhuman

TSL 5

Gene THUMPD1, Length 2,567 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
THUMPD1-206ENST00000636554 SYNGR2O43760 224 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 ZNF737O75373 536 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 PFN1P07737 140 aaKnown RBP12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 UMODP07911 640 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 MMP7P09237 267 aaPredicted RBP12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 COX6A1P12074 109 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 SSR4P51571 173 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 MRGPRGQ86SM5 289 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 TGIF2LXQ8IUE1 241 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 SPSB4Q96A44 273 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 TECTBQ96PL2 329 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 HIST1H2AAQ96QV6 131 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 P2RX4Q99571 388 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 C1QTNF5Q9BXJ0 243 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 GPR35Q9HC97 309 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 ESPL1Q14674 2120 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 A0A1W2PR80 420 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 LRRC3CA6NJW4 275 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 IFNL4K9M1U5 179 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 ZNF324BQ6AW86 544 aaPredicted RBP12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 UBALD1Q8TB05 177 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 C2orf88Q9BSF0 95 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 CTDSP1Q9GZU7 261 aa12.76□□□□□ -0.37
THUMPD1-206ENST00000636554 PI4KAP42356 2102 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A10PA6NDY2 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A18PA6NE21 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A16PA6NEW6 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A20PA6NIJ5 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 ARGFXA6NJG6 315 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A8PA6NJQ4 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A7PA6NKC0 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A22PA8MWA6 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A12PA8MX19 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A5PA8MXJ8 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A23PA8MXZ1 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 IGKV1-5P01602 117 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A15PP0C7V4 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A13PP0C7W8 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A14PP0C7W9 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FAM90A24PP0C7X0 464 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 ZNF124Q15973 351 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 SRSF7Q16629 238 aaKnown RBP eCLIP12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 LRRC75BQ2VPJ9 315 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 TMEM41BQ5BJD5 291 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 SPANXN5Q5MJ07 72 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 ZNF66Q6ZN08 573 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 PRR18Q8N4B5 295 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 RNASEH2CQ8TDP1 164 aaKnown RBP12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 GATAD1Q8WUU5 269 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 DNASE2BQ8WZ79 361 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 ZNF845Q96IR2 970 aaPredicted RBP12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 PSMG3Q9BT73 122 aaPredicted RBP12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 SH2D2AQ9NP31 389 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 FSCN3Q9NQT6 498 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 NAT8Q9UHE5 227 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 OR2W1Q9Y3N9 320 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 LY6G6EA0A0G2JKS1 128 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 A0A1W2PPQ1 181 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 EREGO14944 169 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 IGLV2-14P01704 120 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 RFPL3SP0C7P2 107 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 RPL23P62829 140 aaKnown RBP12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 TESK1Q15569 626 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 IGFBP7Q16270 282 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 CYP2G1PQ6ZSU1 146 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 RPP25LQ8N5L8 163 aaKnown RBP12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 OR51G1Q8NGK1 321 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 OR10D3Q8NH80 312 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 OR10J5Q8NHC4 309 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 LHX4Q969G2 390 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 CLDN23Q96B33 292 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 IMMP1LQ96LU5 166 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 OR4C12Q96R67 309 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 PCGF1Q9BSM1 259 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 WDR61Q9GZS3 305 aaKnown RBP12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 ZNF552Q9H707 407 aaPredicted RBP12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 SLC25A22Q9H936 323 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 PRSS50Q9UI38 385 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 U3KQA8 63 aa12.75□□□□□ -0.37
THUMPD1-206ENST00000636554 TNRC6BQ9UPQ9 1833 aaKnown RBP12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 A0A096LPE4 126 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 A0A1W2PPZ6 126 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 GALR2O43603 387 aaPredicted RBP12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 CBR3O75828 277 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 ZNF16P17020 682 aaPredicted RBP12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 GALR1P47211 349 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 MEF2BQ02080 365 aaPredicted RBP12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 COL19A1Q14993 1142 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 HLA-BQ31612 363 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 RAB24Q969Q5 203 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 WFIKKN1Q96NZ8 548 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 PLA2G3Q9NZ20 509 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 PPP1R3CQ9UQK1 317 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 LOC102723996A0A087X1L8 192 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 GJE1A6NN92 205 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 TRAPPC2LH3BP13 241 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 PCBD1P61457 104 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 RAB30Q15771 203 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 BSXQ3C1V8 233 aa12.74□□□□□ -0.37
THUMPD1-206ENST00000636554 PYGO2Q9BRQ0 406 aa12.74□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms