RNA–Protein interactions for RNA: ENST00000635970.1

CLN8-209, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 5

Gene CLN8, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-209ENST00000635970 C20orf24Q9BUV8 137 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 SLC25A31Q9H0C2 315 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 PARP12Q9H0J9 701 aaKnown RBP13.16□□□□□ -0.3
CLN8-209ENST00000635970 SLC2A9Q9NRM0 540 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 TREM2Q9NZC2 230 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 KIAA1456Q9P272 454 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 FBXO7Q9Y3I1 522 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 A0A096LPE4 126 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 A0A1W2PPE2 198 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 A0A1W2PPZ6 126 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 RPL36A-HNRNPH2H7BZ11 118 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 DAOP14920 347 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 S100A2P29034 98 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 ARF1P84077 181 aaKnown RBP13.16□□□□□ -0.3
CLN8-209ENST00000635970 RSU1Q15404 277 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 LYZL2Q7Z4W2 148 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 OR1K1Q8NGR3 316 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 EDARADDQ8WWZ3 215 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 MOB3AQ96BX8 217 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 MUCL1Q96DR8 90 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 SPIN2AQ99865 258 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 SPIN2BQ9BPZ2 258 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 LRBAP50851 2863 aa13.16□□□□□ -0.3
CLN8-209ENST00000635970 FLNBO75369 2602 aaKnown RBP13.15□□□□□ -0.3
CLN8-209ENST00000635970 F5H5K5 113 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 TGOLN2O43493 480 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 PITX3O75364 302 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 MMP9P14780 707 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 MTCP1P56278 107 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 KIAA0141Q14154 515 aaPredicted RBP13.15□□□□□ -0.3
CLN8-209ENST00000635970 DPPA3Q6W0C5 159 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 WFDC8Q8IUA0 241 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 ZNF295-AS1Q8N0V1 137 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 OR2C3Q8N628 320 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 FAM213BQ8TBF2 198 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 NPRL2Q8WTW4 380 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 BOD1Q96IK1 185 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 RSRP1Q9BUV0 290 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 ZNF286AQ9HBT8 521 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 AK3Q9UIJ7 227 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 SETXQ7Z333 2677 aaKnown RBP13.15□□□□□ -0.3
CLN8-209ENST00000635970 TACC2O95359 2948 aa13.15□□□□□ -0.3
CLN8-209ENST00000635970 UNC79Q9P2D8 2635 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 FAM230AA0A1W2PPH8 454 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 OR5H1A6NKK0 313 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 M0R135 149 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 SIAH2O43255 324 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 OR13C7P0DN81 318 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 B4GALT1P15291 398 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 EWSR1Q01844 656 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLN8-209ENST00000635970 TGFBR3Q03167 851 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 ENDOGQ14249 297 aaKnown RBP13.14□□□□□ -0.31
CLN8-209ENST00000635970 FBXL14Q8N1E6 418 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 HSD17B11Q8NBQ5 300 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 FAM222BQ8WU58 562 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 TOMM40LQ969M1 308 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 RBMXL1Q96E39 390 aaKnown RBP13.14□□□□□ -0.31
CLN8-209ENST00000635970 FBXO17Q96EF6 278 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 GNPNAT1Q96EK6 184 aaPredicted RBP13.14□□□□□ -0.31
CLN8-209ENST00000635970 BSCL2Q96G97 398 aaPredicted RBP13.14□□□□□ -0.31
CLN8-209ENST00000635970 ZNF799Q96GE5 643 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 FAAP24Q9BTP7 215 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 PAPOLGQ9BWT3 736 aaKnown RBP13.14□□□□□ -0.31
CLN8-209ENST00000635970 PLEKHF2Q9H8W4 249 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 GAR1Q9NY12 217 aaKnown RBP13.14□□□□□ -0.31
CLN8-209ENST00000635970 ZNF391Q9UJN7 358 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 PIGBOS1A0A0B4J2F0 54 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 DUXBA0A1W2PPF3 345 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 B4DEV8 164 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 DIRAS3O95661 229 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 HSPB1P04792 205 aaKnown RBP13.14□□□□□ -0.31
CLN8-209ENST00000635970 FHITP49789 147 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 NHLH2Q02577 135 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 TIMM23BQ5SRD1 257 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 TMEM182Q6ZP80 229 aaPredicted RBP13.14□□□□□ -0.31
CLN8-209ENST00000635970 LHFPL2Q6ZUX7 228 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 C1orf162Q8NEQ5 155 aaPredicted RBP13.14□□□□□ -0.31
CLN8-209ENST00000635970 PIGTQ969N2 578 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 FOXB1Q99853 325 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 SH3BGRL3Q9H299 93 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 C11orf1Q9H5F2 150 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 IL36GQ9NZH8 169 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 ZDHHC8Q9ULC8 765 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 RCL1Q9Y2P8 373 aaKnown RBP13.14□□□□□ -0.31
CLN8-209ENST00000635970 PUS1Q9Y606 427 aaKnown RBP eCLIP13.14□□□□□ -0.31
CLN8-209ENST00000635970 CSMD1Q96PZ7 3565 aa13.14□□□□□ -0.31
CLN8-209ENST00000635970 SEC14L6B5MCN3 397 aa13.13□□□□□ -0.31
CLN8-209ENST00000635970 HBE1P02100 147 aa13.13□□□□□ -0.31
CLN8-209ENST00000635970 ANOS1P23352 680 aa13.13□□□□□ -0.31
CLN8-209ENST00000635970 RPS10P46783 165 aaKnown RBP13.13□□□□□ -0.31
CLN8-209ENST00000635970 BAXQ07812 192 aa13.13□□□□□ -0.31
CLN8-209ENST00000635970 SP6Q3SY56 376 aa13.13□□□□□ -0.31
CLN8-209ENST00000635970 ZNF600Q6ZNG1 722 aa13.13□□□□□ -0.31
CLN8-209ENST00000635970 WDR31Q8NA23 367 aa13.13□□□□□ -0.31
CLN8-209ENST00000635970 OR52M1Q8NGK5 317 aa13.13□□□□□ -0.31
CLN8-209ENST00000635970 OR10G4Q8NGN3 311 aa13.13□□□□□ -0.31
CLN8-209ENST00000635970 OR2G3Q8NGZ4 309 aa13.13□□□□□ -0.31
CLN8-209ENST00000635970 BCL2L2Q92843 193 aaPredicted RBP13.13□□□□□ -0.31
CLN8-209ENST00000635970 HDHD3Q9BSH5 251 aaPredicted RBP13.13□□□□□ -0.31
CLN8-209ENST00000635970 LIME1Q9H400 295 aa13.13□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 52.9 ms