RNA–Protein interactions for RNA: ENST00000627317.1

PNKP-221, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 767 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-221ENST00000627317 MIDNQ504T8 468 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 ZNF626Q68DY1 528 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 BCL6BQ8N143 479 aaPredicted RBP11.97□□□□□ -0.49
PNKP-221ENST00000627317 OR11H6Q8NGC7 330 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 MAFIPQ8WZ33 124 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 ZNF48Q96MX3 618 aaPredicted RBP11.97□□□□□ -0.49
PNKP-221ENST00000627317 MIXL1Q9H2W2 232 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 ZNF286AQ9HBT8 521 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 GFOD1Q9NXC2 390 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 ZNF230Q9UIE0 474 aaPredicted RBP11.97□□□□□ -0.49
PNKP-221ENST00000627317 FAM96BQ9Y3D0 163 aa11.97□□□□□ -0.49
PNKP-221ENST00000627317 A0A087X0M5 115 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 A0A1B0GX30 115 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 ODF3BA8MYP8 253 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 TRDCB7Z8K6 153 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 IGHV3-7P01780 117 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 MELTFP08582 738 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 PTHLHP12272 177 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 HTD2P86397 168 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 STEAP3Q658P3 488 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 CNIH2Q6PI25 160 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 SNX29P2Q8IUI4 249 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 PIP4P2Q8N4L2 257 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 SIGLECL1Q8N7X8 197 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 OR10V1Q8NGI7 309 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 OR9G1Q8NH87 305 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 ZNF596Q8TC21 504 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 FAM216AQ8WUB2 273 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 LEAP2Q969E1 77 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 NXF2Q9GZY0 626 aaKnown RBP11.96□□□□□ -0.49
PNKP-221ENST00000627317 OR2S2Q9NQN1 319 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 BATF3Q9NR55 127 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 JPT1Q9UK76 154 aa11.96□□□□□ -0.49
PNKP-221ENST00000627317 SOX21Q9Y651 276 aaPredicted RBP11.96□□□□□ -0.49
PNKP-221ENST00000627317 A0A0U1RQK1 487 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 FABP7O15540 132 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 HSPA12AO43301 675 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 SSX5O60225 188 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 PRSS3P35030 304 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 CBX5P45973 191 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 PRRX1P54821 245 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 LOXL3P58215 753 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 UBA52P62987 128 aaKnown RBP11.95□□□□□ -0.5
PNKP-221ENST00000627317 GNMTQ14749 295 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 SRSF7Q16629 238 aaKnown RBP eCLIP11.95□□□□□ -0.5
PNKP-221ENST00000627317 RBMS3Q6XE24 437 aaKnown RBP11.95□□□□□ -0.5
PNKP-221ENST00000627317 C5orf24Q7Z6I8 188 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 OR52L2PQ8NGH6 319 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 OR4A4PQ8NGN8 299 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 GCDHQ92947 438 aaPredicted RBP11.95□□□□□ -0.5
PNKP-221ENST00000627317 DIRAS2Q96HU8 199 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 JMJD8Q96S16 334 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 ST6GALNAC5Q9BVH7 336 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 MMP27Q9H306 513 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 IFT46Q9NQC8 304 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 PSG11Q9UQ72 335 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 TBL2Q9Y4P3 447 aaKnown RBP11.95□□□□□ -0.5
PNKP-221ENST00000627317 AMMECR1Q9Y4X0 333 aaPredicted RBP11.95□□□□□ -0.5
PNKP-221ENST00000627317 A3GALT2U3KPV4 340 aa11.95□□□□□ -0.5
PNKP-221ENST00000627317 A6NHS1 94 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 J3QR06 171 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 RGS11O94810 467 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 FBP1P09467 338 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 SCTP09683 121 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 S100A5P33763 92 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 PPP1CCP36873 323 aaKnown RBP11.94□□□□□ -0.5
PNKP-221ENST00000627317 COMPP49747 757 aaPredicted RBP11.94□□□□□ -0.5
PNKP-221ENST00000627317 DEFB112Q30KQ8 113 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 Q3ZCU0 254 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 UTF1Q5T230 341 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 MINOS1Q5TGZ0 78 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 Q6ZS49 121 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 BEND2Q8NDZ0 799 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 OR10X1Q8NGY0 326 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 ZDHHC16Q969W1 377 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 MMP28Q9H239 520 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 PRDM13Q9H4Q3 707 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 SLC23A1Q9UHI7 598 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 MINOS1-NBL1R4GNA1 71 aa11.94□□□□□ -0.5
PNKP-221ENST00000627317 MDFIC2A0A1B0GVS7 189 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 A0A1W2PPE3 182 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 MEIS3P1A6NDR6 274 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 DNAJC9-AS1A6NH13 148 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 BET1O15155 118 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 TPPPO94811 219 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 IGLV1-47P01700 117 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 HLA-DQB1P01920 261 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 LPLP06858 475 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 GSTT2P0CG29 244 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 GSTT2BP0CG30 244 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 HTR1DP28221 377 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 HLA-DRB5Q30154 266 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 FAM53AQ6NSI3 398 aaPredicted RBP11.93□□□□□ -0.5
PNKP-221ENST00000627317 LHFPL4Q7Z7J7 247 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 OR4P4Q8NGL7 312 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 C15orf40Q8WUR7 153 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 CREB3L1Q96BA8 519 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 OCSTAMPQ9BR26 566 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 CABLES2Q9BTV7 478 aa11.93□□□□□ -0.5
PNKP-221ENST00000627317 SCPEP1Q9HB40 452 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms