RNA–Protein interactions for RNA: ENST00000627232.2

PNKP-220, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 1,530 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-220ENST00000627232 FGF16O43320 207 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 ADAM20O43506 726 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 TFF1P04155 84 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 OR8U9P0C7N5 309 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 NKX2-1P43699 371 aaPredicted RBP18.47■□□□□ 0.55
PNKP-220ENST00000627232 GLIPR1P48060 266 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 TNFAIP6P98066 277 aaPredicted RBP18.47■□□□□ 0.55
PNKP-220ENST00000627232 GNMTQ14749 295 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 SPRNQ5BIV9 151 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 EIF4E3Q8N5X7 224 aaKnown RBP18.47■□□□□ 0.55
PNKP-220ENST00000627232 DMBX1Q8NFW5 382 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 OR8U1Q8NH10 309 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 UBALD1Q8TB05 177 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 FAM222BQ8WU58 562 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 C11orf1Q9H5F2 150 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 LIN7CQ9NUP9 197 aaKnown RBP18.47■□□□□ 0.55
PNKP-220ENST00000627232 KCNS2Q9ULS6 477 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 SESN1Q9Y6P5 492 aa18.47■□□□□ 0.55
PNKP-220ENST00000627232 DPRXA6NFQ7 191 aa18.46■□□□□ 0.55
PNKP-220ENST00000627232 MGST3O14880 152 aa18.46■□□□□ 0.55
PNKP-220ENST00000627232 IGHV1-46P01743 117 aa18.46■□□□□ 0.55
PNKP-220ENST00000627232 SERPINE2P07093 398 aa18.46■□□□□ 0.55
PNKP-220ENST00000627232 DRAM1Q8N682 238 aa18.46■□□□□ 0.55
PNKP-220ENST00000627232 OR51H1Q8NH63 302 aa18.46■□□□□ 0.55
PNKP-220ENST00000627232 MRGPRDQ8TDS7 321 aa18.46■□□□□ 0.55
PNKP-220ENST00000627232 NINJ1Q92982 152 aa18.46■□□□□ 0.55
PNKP-220ENST00000627232 PLEKHF2Q9H8W4 249 aa18.46■□□□□ 0.55
PNKP-220ENST00000627232 JTBO76095 146 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 ADH4P08319 380 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 MMP9P14780 707 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 PVALBP20472 110 aaPredicted RBP18.45■□□□□ 0.54
PNKP-220ENST00000627232 TMEM33P57088 247 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 EIF5AL1Q6IS14 154 aaKnown RBP18.45■□□□□ 0.54
PNKP-220ENST00000627232 ZNF645Q8N7E2 425 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 BOLLQ8N9W6 283 aaKnown RBP18.45■□□□□ 0.54
PNKP-220ENST00000627232 OR13A1Q8NGR1 328 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 Q8TCH9 128 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 LSM10Q969L4 123 aaKnown RBP18.45■□□□□ 0.54
PNKP-220ENST00000627232 DIRC2Q96SL1 478 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 PARP12Q9H0J9 701 aaKnown RBP18.45■□□□□ 0.54
PNKP-220ENST00000627232 NCOR1P1Q9H4R4 102 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 BARX1Q9HBU1 254 aaPredicted RBP18.45■□□□□ 0.54
PNKP-220ENST00000627232 RNF7Q9UBF6 113 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 FBXL17Q9UF56 701 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 PPP1R3CQ9UQK1 317 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 KIAA2026Q5HYC2 2103 aa18.45■□□□□ 0.54
PNKP-220ENST00000627232 ABCD4O14678 606 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 FGF2P09038 288 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 HTD2P86397 168 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 ID3Q02535 119 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 KLRB1Q12918 225 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 CR1LQ2VPA4 569 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 OR52L2PQ8NGH6 319 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 RNF141Q8WVD5 230 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 NGBQ9NPG2 151 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 A0A1B0GU03 582 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 SPINT2O43291 252 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 GZMHP20718 246 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 CASP6P55212 293 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 RPL7L1Q6DKI1 246 aaKnown RBP18.44■□□□□ 0.54
PNKP-220ENST00000627232 FAM216AQ8WUB2 273 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 ARL11Q969Q4 196 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 GCM1Q9NP62 436 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 OR2S2Q9NQN1 319 aa18.44■□□□□ 0.54
PNKP-220ENST00000627232 ANKRD11Q6UB99 2663 aaPredicted RBP18.43■□□□□ 0.54
PNKP-220ENST00000627232 PTPRQQ9UMZ3 2332 aa18.43■□□□□ 0.54
PNKP-220ENST00000627232 A8MXK9 166 aa18.43■□□□□ 0.54
PNKP-220ENST00000627232 C15orf65H3BRN8 121 aa18.43■□□□□ 0.54
PNKP-220ENST00000627232 K7N7A8 449 aa18.43■□□□□ 0.54
PNKP-220ENST00000627232 SHOXO15266 292 aa18.43■□□□□ 0.54
PNKP-220ENST00000627232 BSPH1Q075Z2 132 aa18.43■□□□□ 0.54
PNKP-220ENST00000627232 PRRC2CQ9Y520 2896 aaKnown RBP18.42■□□□□ 0.54
PNKP-220ENST00000627232 CADP27708 2225 aa18.42■□□□□ 0.54
PNKP-220ENST00000627232 IGHV3OR15-7A0A075B7D8 119 aa18.42■□□□□ 0.54
PNKP-220ENST00000627232 ODAMA1E959 279 aa18.42■□□□□ 0.54
PNKP-220ENST00000627232 PITX3O75364 302 aa18.42■□□□□ 0.54
PNKP-220ENST00000627232 CD55P08174 381 aa18.42■□□□□ 0.54
PNKP-220ENST00000627232 UBAC2Q8NBM4 344 aa18.42■□□□□ 0.54
PNKP-220ENST00000627232 TMED6Q8WW62 240 aa18.42■□□□□ 0.54
PNKP-220ENST00000627232 GPR146Q96CH1 333 aa18.42■□□□□ 0.54
PNKP-220ENST00000627232 VSTM5A8MXK1 200 aa18.41■□□□□ 0.54
PNKP-220ENST00000627232 ADIPOQQ15848 244 aa18.41■□□□□ 0.54
PNKP-220ENST00000627232 CCDC28AQ8IWP9 274 aa18.41■□□□□ 0.54
PNKP-220ENST00000627232 ZNF561Q8N587 486 aa18.41■□□□□ 0.54
PNKP-220ENST00000627232 OR2C3Q8N628 320 aa18.41■□□□□ 0.54
PNKP-220ENST00000627232 TCTEX1D1Q8N7M0 179 aa18.41■□□□□ 0.54
PNKP-220ENST00000627232 TPRX1Q8N7U7 411 aa18.41■□□□□ 0.54
PNKP-220ENST00000627232 OR2D2Q9H210 308 aa18.41■□□□□ 0.54
PNKP-220ENST00000627232 ARV1Q9H2C2 271 aa18.41■□□□□ 0.54
PNKP-220ENST00000627232 FAM212BQ9NTI7 297 aaPredicted RBP18.41■□□□□ 0.54
PNKP-220ENST00000627232 SPTBN2O15020 2390 aa18.41■□□□□ 0.54
PNKP-220ENST00000627232 BORCS7-ASMTA0A0B4J1R7 106 aa18.4■□□□□ 0.54
PNKP-220ENST00000627232 TRGV8A0A0C4DH27 118 aa18.4■□□□□ 0.54
PNKP-220ENST00000627232 IGKV1-39P01597 117 aa18.4■□□□□ 0.54
PNKP-220ENST00000627232 IGKV1D-39P04432 117 aa18.4■□□□□ 0.54
PNKP-220ENST00000627232 OR4A8P0C604 315 aa18.4■□□□□ 0.54
PNKP-220ENST00000627232 FAM157CP0CG43 387 aa18.4■□□□□ 0.54
PNKP-220ENST00000627232 ZP3P21754 424 aa18.4■□□□□ 0.54
PNKP-220ENST00000627232 CD80P33681 288 aa18.4■□□□□ 0.54
PNKP-220ENST00000627232 SSTR5P35346 364 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms