RNA–Protein interactions for RNA: ENST00000625216.2

PNKP-217, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 629 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-217ENST00000625216 C12orf4Q9NQ89 552 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 ETAA1Q9NY74 926 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 TAS2R8Q9NYW2 309 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 ZNF107Q9UII5 783 aaPredicted RBP10.35□□□□□ -0.75
PNKP-217ENST00000625216 MAB21L2Q9Y586 359 aa10.35□□□□□ -0.75
PNKP-217ENST00000625216 H3BUI4 141 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 M0QYG6 137 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 ZNF737O75373 536 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 NAPSAO96009 420 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 SELLP14151 372 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 NDUFB7P17568 137 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 HLA-DMAP28067 261 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 PRDX2P32119 198 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 OR3A1P47881 315 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 ATXN7L3Q14CW9 347 aaPredicted RBP10.34□□□□□ -0.75
PNKP-217ENST00000625216 TRIM16LQ309B1 348 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 STEAP1BQ6NZ63 245 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 C17orf107Q6ZR85 190 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 LDLRAD3Q86YD5 345 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 ZNF561Q8N587 486 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 MRPL30Q8TCC3 161 aaKnown RBP10.34□□□□□ -0.75
PNKP-217ENST00000625216 TINAGL1Q9GZM7 467 aaPredicted RBP10.34□□□□□ -0.75
PNKP-217ENST00000625216 CHST6Q9GZX3 395 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 GLS2Q9UI32 602 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 FAM96BQ9Y3D0 163 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 MMP24Q9Y5R2 645 aa10.34□□□□□ -0.75
PNKP-217ENST00000625216 A0A1B0GVG6 124 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 A0A1W2PPH5 198 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 FAM181BA6NEQ2 426 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 ZNF736B4DX44 427 aaPredicted RBP10.33□□□□□ -0.76
PNKP-217ENST00000625216 RAB3DO95716 219 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 ZNF735P0CB33 412 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 AKAIN1P0CW23 69 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 MRPS15P82914 257 aaKnown RBP10.33□□□□□ -0.76
PNKP-217ENST00000625216 RBM39Q14498 530 aaKnown RBP10.33□□□□□ -0.76
PNKP-217ENST00000625216 PLA1AQ53H76 456 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 RSBN1Q5VWQ0 802 aaPredicted RBP10.33□□□□□ -0.76
PNKP-217ENST00000625216 NCR3LG1Q68D85 454 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 MZT2BQ6NZ67 158 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 Q8N7P7 452 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 ASCC1Q8N9N2 400 aaKnown RBP10.33□□□□□ -0.76
PNKP-217ENST00000625216 MINDY2Q8NBR6 621 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 ZNRF1Q8ND25 227 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 TMEM185AQ8NFB2 350 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 BEST4Q8NFU0 473 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 OR5D13Q8NGL4 314 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 TNFRSF14Q92956 283 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 COQ2Q96H96 371 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 ST6GALNAC5Q9BVH7 336 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 DPAGT1Q9H3H5 408 aa10.33□□□□□ -0.76
PNKP-217ENST00000625216 CHMP1AQ9HD42 196 aaPredicted RBP10.33□□□□□ -0.76
PNKP-217ENST00000625216 TRBV6-6A0A0A6YYG2 114 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 A0A0U1RQK1 487 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 NAP1L6A6NFF2 107 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 RNASEK-C17orf49H0YIS7 233 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 NDUFA7O95182 113 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 PMP2P02689 132 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 FBP1P09467 338 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 SLC6A1P30531 599 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 HRH1P35367 487 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 IER3P46695 156 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 CCR6P51684 374 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 UBE2E1P51965 193 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 ZNF880Q6PDB4 577 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 CCBE1Q6UXH8 406 aaPredicted RBP10.32□□□□□ -0.76
PNKP-217ENST00000625216 ZNF497Q6ZNH5 498 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 Q6ZNX1 250 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 C5orf24Q7Z6I8 188 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 GAPTQ8N292 157 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 PIP4P2Q8N4L2 257 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 OR4F5Q8NH21 305 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 OR4K15Q8NH41 348 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 OR56B4Q8NH76 319 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 ENKURQ8TC29 256 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 DEDD2Q8WXF8 326 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 CHIAQ9BZP6 476 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 BEX1Q9HBH7 125 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 Q9N2K0 584 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 SIRT7Q9NRC8 400 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 ING3Q9NXR8 418 aa10.32□□□□□ -0.76
PNKP-217ENST00000625216 KIAA2026Q5HYC2 2103 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 TRAV39A0A0B4J263 110 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 FAM240BA0A1B0GVZ2 78 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 hCG_1809904A0A1W2PP81 198 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 A0A1W2PPE2 198 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 A0A1W2PR64 198 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 A0A1W2PRV1 198 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 CENPXA8MT69 81 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 NPFFO15130 113 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 CSN2P05814 226 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 TBPP20226 339 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 FAUP35544 74 aaKnown RBP10.31□□□□□ -0.76
PNKP-217ENST00000625216 RNASE10Q5GAN6 216 aaKnown RBP10.31□□□□□ -0.76
PNKP-217ENST00000625216 PDZD9Q8IXQ8 264 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 SNX22Q96L94 193 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 FAM234AQ9H0X4 552 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 MMP28Q9H239 520 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 ZNF286AQ9HBT8 521 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 TNFRSF19Q9NS68 423 aa10.31□□□□□ -0.76
PNKP-217ENST00000625216 MCUBQ9NWR8 336 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms