RNA–Protein interactions for RNA: ENST00000620676.4

VPS13D-214, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene VPS13D, Length 16,320 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-214ENST00000620676 PRNTQ86SH4 94 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 C18orf15Q96N68 181 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 BOD1L2Q8IYS8 172 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 RHBDD1Q8TEB9 315 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 TNKS1BP1Q9C0C2 1729 aaKnown RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 PRSS38A1L453 326 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 EMC4Q5J8M3 183 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 APOBEC3DQ96AK3 386 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 LCORQ96JN0 433 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 TMEM147Q9BVK8 224 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 SH2D2AQ9NP31 389 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 C19orf67A6NJJ6 358 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 RPL7P18124 248 aaKnown RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 VSIRQ9H7M9 311 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 TBC1D29Q9UFV1 150 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 UFC1Q9Y3C8 167 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 F2RP25116 425 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 CRYBA2P53672 197 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 C19orf24Q9BVV8 132 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 A0A087WUJ7 227 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 STPG4Q8N801 248 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 RTBDNQ9BSG5 229 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 SLC7A10Q9NS82 523 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 MBNL3Q9NUK0 354 aaKnown RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 M0R135 149 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 GAPDHP04406 335 aaKnown RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 AMY1AP04745 511 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 ZNF799Q96GE5 643 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 RAB40CQ96S21 281 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 DUSP13Q9UII6 198 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 FOXD3Q9UJU5 478 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 NPTNQ9Y639 398 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 NAV1Q8NEY1 1877 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 PGPEP1LA6NFU8 196 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 PCBD1P61457 104 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 ZXDCQ2QGD7 858 aaPredicted RBP4.39□□□□□ -1.71
VPS13D-214ENST00000620676 TDRG1Q3Y452 100 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 TMEM56Q96MV1 263 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 CYTL1Q9NRR1 136 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 J3KRW8 73 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 PLAUP00749 431 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 UMODP07911 640 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 HLA-GP17693 338 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 ZNF83P51522 516 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 MPV17L2Q567V2 206 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 GFI1Q99684 422 aa4.39□□□□□ -1.71
VPS13D-214ENST00000620676 FXYD7P58549 80 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 ZNF260Q3ZCT1 412 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 SCGB1D4Q6XE38 83 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 TMEM136Q6ZRR5 245 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 CNEP1R1Q8N9A8 125 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 CD99L2Q8TCZ2 262 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 TIMM9Q9Y5J7 89 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 PTPRFP10586 1907 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 TIMM8AO60220 97 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-214ENST00000620676 C1QTNF9P0C862 333 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 LIMS1P48059 325 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 METRNLQ641Q3 311 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 GJC3Q8NFK1 279 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 OR4S2Q8NH73 311 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 TOPAZ1Q8N9V7 1692 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 PDE6DO43924 150 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 LAG3P18627 525 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 ZFP30Q9Y2G7 519 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 AKAP6Q13023 2319 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 INTS1Q8N201 2190 aaKnown RBP4.38□□□□□ -1.71
VPS13D-214ENST00000620676 NGFRP08138 427 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 AZU1P20160 251 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 FOXL2P58012 376 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 MEF2BQ02080 365 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-214ENST00000620676 GNRHR2Q96P88 292 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 ANXA10Q9UJ72 324 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 PRAMEF26H0Y7S4 382 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 TSPAN13O95857 204 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 OR1D5P58170 312 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 KLRB1Q12918 225 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 RTL8BQ17RB0 113 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 GCSAMLQ5JQS6 135 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 CORTO00230 105 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 DNPH1O43598 174 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 ADAMTSL5Q6ZMM2 481 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 ADTRPQ96IZ2 230 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 AP5S1Q9NUS5 200 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 ANKRD36CQ5JPF3 1778 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 PLPP3O14495 311 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 GPR183P32249 361 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 CBLN3Q6UW01 205 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 ADAMTSL4Q6UY14 1074 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 VKORC1L1Q8N0U8 176 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 LINC00615Q96LM1 132 aaPredicted RBP4.38□□□□□ -1.71
VPS13D-214ENST00000620676 ZNF488Q96MN9 340 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 PKD1L3Q7Z443 1732 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 IGKV1D-16P01601 117 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 MZT1Q08AG7 82 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 SYNGR2O43760 224 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 CD200R1LQ6Q8B3 271 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 F11P03951 625 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 OR2V1Q8NHB1 315 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 GPR146Q96CH1 333 aa4.38□□□□□ -1.71
VPS13D-214ENST00000620676 MRGPRX3Q96LB0 322 aa4.38□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 53.9 ms