RNA–Protein interactions for RNA: ENST00000619119.4

SEMA3B-214, Transcript of semaphorin 3B, humanhuman

TSL 5

Gene SEMA3B, Length 3,158 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3B-214ENST00000619119 TMEM234Q8WY98 164 aa13.62□□□□□ -0.23
SEMA3B-214ENST00000619119 CISD1Q9NZ45 108 aaKnown RBP13.62□□□□□ -0.23
SEMA3B-214ENST00000619119 NAT8Q9UHE5 227 aa13.62□□□□□ -0.23
SEMA3B-214ENST00000619119 R4GMQ9 66 aa13.62□□□□□ -0.23
SEMA3B-214ENST00000619119 PITX3O75364 302 aa13.62□□□□□ -0.23
SEMA3B-214ENST00000619119 KLF7O75840 302 aaPredicted RBP13.62□□□□□ -0.23
SEMA3B-214ENST00000619119 PCOLCEQ15113 449 aa13.62□□□□□ -0.23
SEMA3B-214ENST00000619119 CST9LQ9H4G1 147 aa13.62□□□□□ -0.23
SEMA3B-214ENST00000619119 IGHV2-70DA0A0C4DH43 119 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 J3QW42 95 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 SSSCA1O60232 199 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 CDS2O95674 445 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 ABCA11PQ4W5N1 156 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 SPATA45Q537H7 98 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 SP5Q6BEB4 398 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 CTSDP07339 412 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 LHFPL4Q7Z7J7 247 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 G6PC2Q9NQR9 355 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 IL19Q9UHD0 177 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 WIPI2Q9Y4P8 454 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 NPIPB7O75200 414 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 TPPP2P59282 170 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 KRTDAPP60985 99 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 SGCBQ16585 318 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 MYPOPQ86VE0 399 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 WDFY1Q8IWB7 410 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 CISD2Q8N5K1 135 aaKnown RBP13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 OR5D18Q8NGL1 313 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 OR52N5Q8NH56 324 aa13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 GNPNAT1Q96EK6 184 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 ZNF703Q9H7S9 590 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 ZNF430Q9H8G1 570 aaPredicted RBP13.61□□□□□ -0.23
SEMA3B-214ENST00000619119 ASPMQ8IZT6 3477 aa13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 RPL23P62829 140 aaKnown RBP13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 TMEM187Q14656 261 aa13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 RTN4IP1Q8WWV3 396 aaPredicted RBP13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 GPER1Q99527 375 aa13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 EML6Q6ZMW3 1958 aa13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 A0A0U1RQK1 487 aa13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 ROM1Q03395 351 aa13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 FAM78BQ5VT40 261 aa13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 SPACA9Q96E40 222 aaPredicted RBP13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 MED29Q9NX70 200 aa13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 NXT1Q9UKK6 140 aaKnown RBP13.6□□□□□ -0.23
SEMA3B-214ENST00000619119 IGHV1-45A0A0A0MS14 117 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 IGHV2OR16-5A0A0B4J2B6 119 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 MT-ATP6P00846 226 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 CTLA4P16410 223 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 TCN2P20062 427 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 DTYMKP23919 212 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 OTX2P32243 289 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 CDC34P49427 236 aaPredicted RBP13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 COMMD2Q86X83 199 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 TMEM252Q8N6L7 170 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 OR51T1Q8NGJ9 327 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 BCL2L2Q92843 193 aaPredicted RBP13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 LOXL2Q9Y4K0 774 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 PLPP3O14495 311 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 EFNA2O43921 213 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 PTGDSP41222 190 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 RPL27P61353 136 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 ZNF154Q13106 437 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 MRPL49Q13405 166 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 H1FOOQ8IZA3 346 aaPredicted RBP13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 HDHD3Q9BSH5 251 aaPredicted RBP13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 FAM103A1Q9BTL3 118 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 NAA60Q9H7X0 242 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 UQCR10Q9UDW1 63 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 A0A1W2PNR3 127 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 COX6A1P12074 109 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 IL3RAP26951 378 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 SUMO1P63165 101 aaKnown RBP13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 POU3F1Q03052 451 aaPredicted RBP13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 TMEM108Q6UXF1 575 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 TCF23Q7RTU1 214 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 EMC6Q9BV81 110 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 SAMD10Q9BYL1 202 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 WDR54Q9H977 334 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 SLC45A2Q9UMX9 530 aa13.59□□□□□ -0.23
SEMA3B-214ENST00000619119 URB1O60287 2271 aaKnown RBP13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 ZNF732B4DXR9 585 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 PSG1P11464 419 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 BLVRBP30043 206 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 FMODQ06828 376 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 CYP2G1PQ6ZSU1 146 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 VSIRQ9H7M9 311 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 HSPB7Q9UBY9 170 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 PRSS37A4D1T9 235 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 BMI1P35226 326 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 FOLR3P41439 243 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 TLE3Q04726 772 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 EMC4Q5J8M3 183 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 WFDC8Q8IUA0 241 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 OR4B1Q8NGF8 309 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 OR2Y1Q8NGV0 311 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 KCNG3Q8TAE7 436 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 ST8SIA1Q92185 356 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 IMMP2LQ96T52 175 aa13.58□□□□□ -0.24
SEMA3B-214ENST00000619119 RBM24Q9BX46 236 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms