RNA–Protein interactions for RNA: ENST00000618061.4

CBWD1-226, Transcript of COBW domain containing 1, humanhuman

TSL 1 (best)

Gene CBWD1, Length 2,182 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD1-226ENST00000618061 FAM74A3Q4VXF1 159 aa11.7□□□□□ -0.54
CBWD1-226ENST00000618061 BEND4Q6ZU67 534 aa11.7□□□□□ -0.54
CBWD1-226ENST00000618061 ODF3L1Q8IXM7 274 aa11.7□□□□□ -0.54
CBWD1-226ENST00000618061 SNIP1Q8TAD8 396 aaKnown RBP11.7□□□□□ -0.54
CBWD1-226ENST00000618061 MRGPRDQ8TDS7 321 aa11.7□□□□□ -0.54
CBWD1-226ENST00000618061 C17orf50Q8WW18 174 aa11.7□□□□□ -0.54
CBWD1-226ENST00000618061 GPR146Q96CH1 333 aa11.7□□□□□ -0.54
CBWD1-226ENST00000618061 COQ2Q96H96 371 aa11.7□□□□□ -0.54
CBWD1-226ENST00000618061 DCTN5Q9BTE1 182 aa11.7□□□□□ -0.54
CBWD1-226ENST00000618061 BCL2L14Q9BZR8 327 aa11.7□□□□□ -0.54
CBWD1-226ENST00000618061 MBNL3Q9NUK0 354 aaKnown RBP11.7□□□□□ -0.54
CBWD1-226ENST00000618061 PTPRZ1P23471 2315 aaPredicted RBP11.7□□□□□ -0.54
CBWD1-226ENST00000618061 C12orf77C9JDV5 145 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 F8W036 122 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP11.69□□□□□ -0.54
CBWD1-226ENST00000618061 EGR1P18146 543 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 KITLGP21583 273 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 GABRA2P47869 451 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 BLOC1S1P78537 153 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 COL10A1Q03692 680 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 P2RY6Q15077 328 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 OR2B11Q5JQS5 317 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 GPR157Q5UAW9 335 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 EIF5AL1Q6IS14 154 aaKnown RBP11.69□□□□□ -0.54
CBWD1-226ENST00000618061 ASCL5Q7RTU5 278 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 RNASE11Q8TAA1 199 aaKnown RBP11.69□□□□□ -0.54
CBWD1-226ENST00000618061 TMEM171Q8WVE6 324 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 TLNRD1Q9H1K6 362 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 TREM2Q9NZC2 230 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 WIPI2Q9Y4P8 454 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 RELNP78509 3460 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 ICE1Q9Y2F5 2266 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 IGHV3-43A0A0B4J1X8 118 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 LOC105371267A0A1B0GV96 52 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 HEXAP06865 529 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 IGHV3-43DP0DP04 118 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 GLIPR1P48060 266 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 HMGN3Q15651 99 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 LTC4SQ16873 150 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 UQCC3Q6UW78 93 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 ZNF808Q8N4W9 903 aaPredicted RBP11.69□□□□□ -0.54
CBWD1-226ENST00000618061 DRAM1Q8N682 238 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 RFESDQ8TAC1 157 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 PLPPR2Q96GM1 343 aa11.69□□□□□ -0.54
CBWD1-226ENST00000618061 TSNAXQ99598 290 aaKnown RBP11.69□□□□□ -0.54
CBWD1-226ENST00000618061 IGHV3OR15-7A0A075B7D8 119 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 BORCS7-ASMTA0A0B4J1R7 106 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 C9JQL5 133 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 ATG12O94817 140 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 SSTR5P35346 364 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 LINC00205P59089 165 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 VAMP2P63027 116 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 ZNF616Q08AN1 781 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 FAM27E3Q08E93 113 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 EDDM3AQ14507 147 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 SWI5Q1ZZU3 235 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 C1orf185Q5T7R7 199 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 FIP1L1Q6UN15 594 aaKnown RBP11.68□□□□□ -0.54
CBWD1-226ENST00000618061 BTNL8Q6UX41 500 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 MOB1BQ7L9L4 216 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 PUSL1Q8N0Z8 303 aaKnown RBP11.68□□□□□ -0.54
CBWD1-226ENST00000618061 TMEM252Q8N6L7 170 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 LRRC29Q8WV35 223 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 SAT2Q96F10 170 aaPredicted RBP11.68□□□□□ -0.54
CBWD1-226ENST00000618061 SPIN2AQ99865 258 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 SPIN2BQ9BPZ2 258 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 ZFP57Q9NU63 452 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 SH3BGRL2Q9UJC5 107 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 WASF3Q9UPY6 502 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 TMEM30CPA0ZSE6 113 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 DEFB108AA8MXU0 73 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 WRBO00258 174 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 ATF4P18848 351 aaPredicted RBP11.68□□□□□ -0.54
CBWD1-226ENST00000618061 BMP5P22003 454 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 S100GP29377 79 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 DYNLT3P51808 116 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 ID3Q02535 119 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 ZNF585BQ52M93 769 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 SHEQ5VZ18 495 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 MBNL2Q5VZF2 373 aaKnown RBP11.68□□□□□ -0.54
CBWD1-226ENST00000618061 TMEM182Q6ZP80 229 aaPredicted RBP11.68□□□□□ -0.54
CBWD1-226ENST00000618061 CD177Q8N6Q3 437 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 OR5C1Q8NGR4 320 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 C5orf30Q96GV9 206 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 GINS3Q9BRX5 216 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 LRFN3Q9BTN0 628 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 NKX6-2Q9C056 277 aaPredicted RBP11.68□□□□□ -0.54
CBWD1-226ENST00000618061 ARV1Q9H2C2 271 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 UQCC1Q9NVA1 299 aa11.68□□□□□ -0.54
CBWD1-226ENST00000618061 MAP1BP46821 2468 aaKnown RBP11.67□□□□□ -0.54
CBWD1-226ENST00000618061 C1QTNF9BB2RNN3 333 aa11.67□□□□□ -0.54
CBWD1-226ENST00000618061 NPIPB11E5RHQ5 1161 aa11.67□□□□□ -0.54
CBWD1-226ENST00000618061 DNASE2O00115 360 aaPredicted RBP11.67□□□□□ -0.54
CBWD1-226ENST00000618061 IGKV1-5P01602 117 aa11.67□□□□□ -0.54
CBWD1-226ENST00000618061 HBZP02008 142 aa11.67□□□□□ -0.54
CBWD1-226ENST00000618061 SPP1P10451 314 aa11.67□□□□□ -0.54
CBWD1-226ENST00000618061 PVALBP20472 110 aaPredicted RBP11.67□□□□□ -0.54
CBWD1-226ENST00000618061 CD80P33681 288 aa11.67□□□□□ -0.54
CBWD1-226ENST00000618061 PPP1CCP36873 323 aaKnown RBP11.67□□□□□ -0.54
CBWD1-226ENST00000618061 PAX9P55771 341 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms