RNA–Protein interactions for RNA: ENST00000616692.1

NOP56-220, Transcript of NOP56 ribonucleoprotein, humanhuman

TSL 1 (best)

Gene NOP56, Length 2,662 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOP56-220ENST00000616692 JMJD7P0C870 316 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 PRSS3P35030 304 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 GNG3P63215 75 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 RAB32Q13637 225 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 ASCL4Q6XD76 172 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 ZNF433Q8N7K0 673 aaPredicted RBP13.21□□□□□ -0.29
NOP56-220ENST00000616692 OR13G1Q8NGZ3 307 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 OR4A5Q8NH83 315 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 OR5B12Q96R08 314 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 CHRDL1Q9BU40 450 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 MED20Q9H944 212 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 NUDT4Q9NZJ9 180 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 LOXL2Q9Y4K0 774 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 DOCK9Q9BZ29 2069 aa13.21□□□□□ -0.29
NOP56-220ENST00000616692 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.21□□□□□ -0.3
NOP56-220ENST00000616692 M0R1X1 148 aa13.21□□□□□ -0.3
NOP56-220ENST00000616692 CD5LO43866 347 aa13.21□□□□□ -0.3
NOP56-220ENST00000616692 EDNRAP25101 427 aa13.21□□□□□ -0.3
NOP56-220ENST00000616692 CFHR2P36980 270 aa13.21□□□□□ -0.3
NOP56-220ENST00000616692 MEF2BQ02080 365 aaPredicted RBP13.21□□□□□ -0.3
NOP56-220ENST00000616692 APOBEC4Q8WW27 367 aaKnown RBP13.21□□□□□ -0.3
NOP56-220ENST00000616692 SMIM3Q9BZL3 60 aa13.21□□□□□ -0.3
NOP56-220ENST00000616692 VN1R1Q9GZP7 353 aa13.21□□□□□ -0.3
NOP56-220ENST00000616692 ZNF160Q9HCG1 818 aa13.21□□□□□ -0.3
NOP56-220ENST00000616692 FBXL7Q9UJT9 491 aa13.21□□□□□ -0.3
NOP56-220ENST00000616692 KLHDC2Q9Y2U9 406 aa13.21□□□□□ -0.3
NOP56-220ENST00000616692 V9GY05 133 aa13.21□□□□□ -0.3
NOP56-220ENST00000616692 ZNF462Q96JM2 2506 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 GALR1P47211 349 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 AMZ1Q400G9 498 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 CPEB2Q7Z5Q1 589 aaKnown RBP13.2□□□□□ -0.3
NOP56-220ENST00000616692 C17orf82Q86X59 251 aaPredicted RBP13.2□□□□□ -0.3
NOP56-220ENST00000616692 UMODL1-AS1Q8N2C9 162 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 ZDHHC22Q8N966 263 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 SLC25A40Q8TBP6 338 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 LRP4O75096 1905 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 BORCS7-ASMTA0A0B4J1R7 106 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 A0A1W2PQM1 296 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 FGF10O15520 208 aaPredicted RBP13.2□□□□□ -0.3
NOP56-220ENST00000616692 KRTDAPP60985 99 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 TBR1Q16650 682 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 ZNF658BQ4V348 819 aaPredicted RBP13.2□□□□□ -0.3
NOP56-220ENST00000616692 C16orf82Q7Z2V1 217 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 NECAP1Q8NC96 275 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 UBTD2Q8WUN7 234 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 SLC25A18Q9H1K4 315 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 SDF2L1Q9HCN8 221 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 SCN8AQ9UQD0 1980 aa13.2□□□□□ -0.3
NOP56-220ENST00000616692 J3QLW9 94 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 CCL22O00626 93 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 COX7A2P14406 83 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 AOAHP28039 575 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 C1orf61Q13536 156 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 EIF2B1Q14232 305 aaKnown RBP13.19□□□□□ -0.3
NOP56-220ENST00000616692 NRN1LQ496H8 165 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 MPV17L2Q567V2 206 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 COX20Q5RI15 118 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 BVES-AS1Q5T3Y7 98 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 UEVLDQ8IX04 471 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 NINJ1Q92982 152 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 SLC25A51Q9H1U9 297 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 PATZ1Q9HBE1 687 aaKnown RBP13.19□□□□□ -0.3
NOP56-220ENST00000616692 AK3Q9UIJ7 227 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 ST6GALNAC2Q9UJ37 374 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 CFAP46Q8IYW2 2715 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 PCBP3P57721 371 aaKnown RBP13.19□□□□□ -0.3
NOP56-220ENST00000616692 RHOAP61586 193 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 HIST1H1AQ02539 215 aaPredicted RBP13.19□□□□□ -0.3
NOP56-220ENST00000616692 MSMO1Q15800 293 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 SLC18B1Q6NT16 456 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 GCM1Q9NP62 436 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 LHX3Q9UBR4 397 aa13.19□□□□□ -0.3
NOP56-220ENST00000616692 ASXL3Q9C0F0 2248 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 PRPH2P23942 346 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 SRSF1Q07955 248 aaKnown RBP eCLIP13.18□□□□□ -0.36e-7■■□□□ 13.4
NOP56-220ENST00000616692 IAH1Q2TAA2 248 aaPredicted RBP13.18□□□□□ -0.3
NOP56-220ENST00000616692 FAM90A2PQ658T7 463 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 TMEM42Q69YG0 159 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 NPWQ8N729 165 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 NEU4Q8WWR8 484 aaPredicted RBP13.18□□□□□ -0.3
NOP56-220ENST00000616692 NDFIP1Q9BT67 221 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 CTNNBIP1Q9NSA3 81 aaPredicted RBP13.18□□□□□ -0.3
NOP56-220ENST00000616692 CSDC2Q9Y534 153 aaKnown RBP13.18□□□□□ -0.3
NOP56-220ENST00000616692 SETXQ7Z333 2677 aaKnown RBP13.18□□□□□ -0.3
NOP56-220ENST00000616692 A0A0J9YY10 115 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 TEX48A0A1B0GUV7 120 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 A0A1B0GX78 115 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 TNFSF12O43508 249 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 HRASP01112 189 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 POLR2LP62875 67 aaKnown RBP13.18□□□□□ -0.3
NOP56-220ENST00000616692 B4GALNT1Q00973 533 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 LTBQ06643 244 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 FFAR4Q5NUL3 377 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 DCST2Q5T1A1 773 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 OR4N2Q8NGD1 307 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 OR4D11Q8NGI4 311 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 WASHC3Q9Y3C0 194 aa13.18□□□□□ -0.3
NOP56-220ENST00000616692 TTRP02766 147 aa13.17□□□□□ -0.3
NOP56-220ENST00000616692 OR10V1Q8NGI7 309 aa13.17□□□□□ -0.3
NOP56-220ENST00000616692 ADOQ96SZ5 270 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms