RNA–Protein interactions for RNA: ENST00000613856.4

SLIRP-212, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SLIRP, Length 420 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-212ENST00000613856 SPNP16150 400 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 CCR6P51684 374 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 WDR25Q64LD2 544 aaPredicted RBP9.43□□□□□ -0.9
SLIRP-212ENST00000613856 PLET1Q6UQ28 207 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 DHRS11Q6UWP2 260 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 CCBE1Q6UXH8 406 aaPredicted RBP9.43□□□□□ -0.9
SLIRP-212ENST00000613856 IDO2Q6ZQW0 420 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 BTN2A1Q7KYR7 527 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 FGFRL1Q8N441 504 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 ZNF565Q8N9K5 539 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 OR13C8Q8NGS7 320 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 C8orf46Q8TAG6 207 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 MRGPRDQ8TDS7 321 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 FAM168AQ92567 244 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 CREB3L1Q96BA8 519 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 SLC25A21Q9BQT8 299 aaPredicted RBP9.43□□□□□ -0.9
SLIRP-212ENST00000613856 BPESC1Q9GZL8 116 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 TOLLIPQ9H0E2 274 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 TAS2R3Q9NYW6 316 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 CALYQ9NYX4 217 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 NUBP2Q9Y5Y2 271 aa9.43□□□□□ -0.9
SLIRP-212ENST00000613856 A8MXK9 166 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 F2RL2O00254 374 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 SDCBPO00560 298 aaPredicted RBP9.42□□□□□ -0.9
SLIRP-212ENST00000613856 SPINT2O43291 252 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 TUSC2O75896 110 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 IGHV2-5P01817 119 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 SSTR5P35346 364 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 ECI1P42126 302 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 RAG2P55895 527 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 SEC61A1P61619 476 aaKnown RBP9.42□□□□□ -0.9
SLIRP-212ENST00000613856 TSPAN5P62079 268 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 RPL31P62899 125 aaKnown RBP9.42□□□□□ -0.9
SLIRP-212ENST00000613856 HTD2P86397 168 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 SURF2Q15527 256 aaPredicted RBP9.42□□□□□ -0.9
SLIRP-212ENST00000613856 IGSF11Q5DX21 431 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 Q6ZNX1 250 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 ZDHHC22Q8N966 263 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 OR6F1Q8NGZ6 308 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 TERB2Q8NHR7 220 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 GIMAP1Q8WWP7 306 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 MRGPRFQ96AM1 343 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 UPRTQ96BW1 309 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 GALMQ96C23 342 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 KIRREL1Q96J84 757 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 GINS4Q9BRT9 223 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 MARVELD1Q9BSK0 173 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 DCTN5Q9BTE1 182 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 C20orf85Q9H1P6 137 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 GAL3ST2Q9H3Q3 398 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 C19orf12Q9NSK7 152 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 CLN8Q9UBY8 286 aa9.42□□□□□ -0.9
SLIRP-212ENST00000613856 KBTBD11-OT1A0A1B0GTJ5 212 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 BET1O15155 118 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 IL2RGP31785 369 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 MECP2P51608 486 aaKnown RBP9.41□□□□□ -0.9
SLIRP-212ENST00000613856 ZNF273Q14593 569 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 C17orf58Q2M2W7 97 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 SCGB2B2Q4G0G5 96 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 ESCO2Q56NI9 601 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 AADACL3Q5VUY0 350 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 GLCCI1Q86VQ1 547 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 H1FOOQ8IZA3 346 aaPredicted RBP9.41□□□□□ -0.9
SLIRP-212ENST00000613856 OR10A7Q8NGE5 316 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 OR1L1Q8NH94 360 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 OR10J5Q8NHC4 309 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 CLDND2Q8NHS1 167 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 FAM216AQ8WUB2 273 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 H1FXQ92522 213 aaKnown RBP9.41□□□□□ -0.9
SLIRP-212ENST00000613856 ARL11Q969Q4 196 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 MOB3AQ96BX8 217 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 RAB39BQ96DA2 213 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 DMRTB1Q96MA1 342 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 ZNF2Q9BSG1 426 aaPredicted RBP9.41□□□□□ -0.9
SLIRP-212ENST00000613856 SSBP3Q9BWW4 388 aaPredicted RBP9.41□□□□□ -0.9
SLIRP-212ENST00000613856 NUDT15Q9NV35 164 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 JPT1Q9UK76 154 aa9.41□□□□□ -0.9
SLIRP-212ENST00000613856 OR5H14A6NHG9 310 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 PPYP01298 95 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 SLC25A16P16260 332 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 ZBTB25P24278 435 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 FPR2P25090 351 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 FCGR2CP31995 323 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 UCP3P55916 312 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 DLX6P56179 175 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 LMO4P61968 165 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 GNB2P62879 340 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 TMEM249Q2WGJ8 235 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 LY6G6FQ5SQ64 297 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 TMEM200BQ69YZ2 307 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 C5orf24Q7Z6I8 188 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 FAM185AQ8N0U4 392 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 PRR18Q8N4B5 295 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 LY6G5BQ8NDX9 201 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 OR52M1Q8NGK5 317 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 IL1F10Q8WWZ1 152 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 ZNF714Q96N38 554 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 SCGB3A2Q96PL1 93 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 FXYD6Q9H0Q3 95 aa9.4□□□□□ -0.9
SLIRP-212ENST00000613856 MMP28Q9H239 520 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms