RNA–Protein interactions for RNA: ENST00000613122.4

CTDP1-208, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTDP1, Length 5,866 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-208ENST00000613122 HMSDA8MTL9 139 aa17.48■□□□□ 0.39
CTDP1-208ENST00000613122 FCGR3AP08637 254 aa17.48■□□□□ 0.39
CTDP1-208ENST00000613122 IFI6P09912 130 aa17.48■□□□□ 0.39
CTDP1-208ENST00000613122 COL8A1P27658 744 aa17.48■□□□□ 0.39
CTDP1-208ENST00000613122 ZNF826PQ6ZT77 177 aa17.48■□□□□ 0.39
CTDP1-208ENST00000613122 TDRD15B5MCY1 1934 aaKnown RBP17.48■□□□□ 0.39
CTDP1-208ENST00000613122 CALHM1Q8IU99 346 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 GHITMQ9H3K2 345 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 LEUTXA8MZ59 168 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 CYB5R3P00387 301 aaPredicted RBP17.47■□□□□ 0.39
CTDP1-208ENST00000613122 CRHP06850 196 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 RGPD3A6NKT7 1758 aaPredicted RBP17.47■□□□□ 0.39
CTDP1-208ENST00000613122 RBFOX3A6NFN3 312 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 MGPP08493 103 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 IZUMO4Q1ZYL8 232 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 PITPNC1Q9UKF7 332 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 RANP62826 216 aaKnown RBP17.47■□□□□ 0.39
CTDP1-208ENST00000613122 PTX4Q96A99 478 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 NAT8Q9UHE5 227 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 WASHC3Q9Y3C0 194 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 PPP1R32Q7Z5V6 425 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 SPSB2Q99619 263 aa17.47■□□□□ 0.39
CTDP1-208ENST00000613122 DUXBA0A1W2PPF3 345 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 FAM87AP0C7U9 286 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 EBLN2Q6P2I7 272 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 FDX2Q6P4F2 183 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 TMEM116Q8NCL8 245 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 SRXN1Q9BYN0 137 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 PPIAL4CA0A0B4J2A2 164 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 PPIAL4GP0DN37 164 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 NANOS3P60323 173 aaKnown RBP17.46■□□□□ 0.39
CTDP1-208ENST00000613122 EWSR1Q01844 656 aaKnown RBP eCLIP17.46■□□□□ 0.39
CTDP1-208ENST00000613122 ADAD2Q8NCV1 583 aaKnown RBP17.46■□□□□ 0.39
CTDP1-208ENST00000613122 IL19Q9UHD0 177 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 CTSBP07858 339 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 G0S2P27469 103 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 EFNB2P52799 333 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 RIGQ13278 110 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 SNRNP40Q96DI7 357 aaKnown RBP17.46■□□□□ 0.39
CTDP1-208ENST00000613122 SEC11CQ9BY50 192 aa17.46■□□□□ 0.39
CTDP1-208ENST00000613122 FAM157CP0CG43 387 aa17.46■□□□□ 0.38
CTDP1-208ENST00000613122 KLF9Q13886 244 aaPredicted RBP17.46■□□□□ 0.38
CTDP1-208ENST00000613122 FAM209AQ5JX71 171 aa17.46■□□□□ 0.38
CTDP1-208ENST00000613122 AUP1Q9Y679 476 aa17.46■□□□□ 0.38
CTDP1-208ENST00000613122 MRPS18AQ9NVS2 196 aaKnown RBP17.45■□□□□ 0.38
CTDP1-208ENST00000613122 TIAF1O95411 115 aa17.45■□□□□ 0.38
CTDP1-208ENST00000613122 CD40P25942 277 aa17.45■□□□□ 0.38
CTDP1-208ENST00000613122 TFPI2P48307 235 aa17.45■□□□□ 0.38
CTDP1-208ENST00000613122 HAX1O00165 279 aa17.45■□□□□ 0.38
CTDP1-208ENST00000613122 SYNGR3O43761 229 aa17.45■□□□□ 0.38
CTDP1-208ENST00000613122 ROM1Q03395 351 aa17.45■□□□□ 0.38
CTDP1-208ENST00000613122 LURAP1Q96LR2 239 aa17.45■□□□□ 0.38
CTDP1-208ENST00000613122 GPX7Q96SL4 187 aaPredicted RBP17.45■□□□□ 0.38
CTDP1-208ENST00000613122 IDI2-AS1Q9NZ38 188 aa17.45■□□□□ 0.38
CTDP1-208ENST00000613122 RCC2Q9P258 522 aaKnown RBP17.45■□□□□ 0.38
CTDP1-208ENST00000613122 TMEM229AB2RXF0 380 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 SMIM10L1P0DMW3 83 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 WNT5AP41221 380 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 RIPPLY2Q5TAB7 128 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 OR4A5Q8NH83 315 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 SMIM10Q96HG1 83 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 LOC105371242A0A075B767 164 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 A0A1W2PS18 150 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 DHRS7CA6NNS2 312 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 USF1P22415 310 aaPredicted RBP17.44■□□□□ 0.38
CTDP1-208ENST00000613122 UNQ5815/PRO19632Q6UWF5 114 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 TMEM91Q6ZNR0 172 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 EIF4E3Q8N5X7 224 aaKnown RBP17.44■□□□□ 0.38
CTDP1-208ENST00000613122 LINC01560Q8TB33 94 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 CXorf1O96002 111 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 ZP3P21754 424 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 IRF3Q14653 427 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 KLF14Q8TD94 323 aaPredicted RBP17.44■□□□□ 0.38
CTDP1-208ENST00000613122 VAMP8Q9BV40 100 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 BRWD3Q6RI45 1802 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 LIMS1P48059 325 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 ABHD14BQ96IU4 210 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 HYPMO75409 117 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 FSTP19883 344 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 MUC15Q8N387 334 aa17.44■□□□□ 0.38
CTDP1-208ENST00000613122 CD1AP06126 327 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 SLC35E3Q7Z769 313 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 OR10G8Q8NGN5 311 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 PKIBQ9C010 78 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 IGHV1-69-2A0A0G2JMI3 117 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 B9A039 149 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 RGS13O14921 159 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 BSXQ3C1V8 233 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 PCSK4Q6UW60 755 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 TIMP4Q99727 224 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 SRD5A3Q9H8P0 318 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 FUT5Q11128 374 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 RNF212Q495C1 297 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 C4orf51C9J302 202 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 MFNGO00587 321 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 SMAD7O15105 426 aaKnown RBP17.43■□□□□ 0.38
CTDP1-208ENST00000613122 GUCD1Q96NT3 240 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 METTL26Q96S19 204 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 PRDM14Q9GZV8 571 aa17.43■□□□□ 0.38
CTDP1-208ENST00000613122 KLK13Q9UKR3 277 aa17.43■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms