RNA–Protein interactions for RNA: ENST00000611869.4

TCF3-220, Transcript of transcription factor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TCF3, Length 4,409 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF3-220ENST00000611869 FAM90A20PA6NIJ5 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A8PA6NJQ4 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A7PA6NKC0 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A22PA8MWA6 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A12PA8MX19 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A5PA8MXJ8 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A23PA8MXZ1 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A15PP0C7V4 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A13PP0C7W8 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A14PP0C7W9 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 FAM90A24PP0C7X0 464 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 PRDX2P32119 198 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 MRPS11P82912 194 aaKnown RBP11.27□□□□□ -0.6
TCF3-220ENST00000611869 STUMQ69YW2 141 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 OR5D13Q8NGL4 314 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 WNT2BQ93097 391 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 ATP5SQ99766 215 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 TCEAL7Q9BRU2 100 aa11.27□□□□□ -0.6
TCF3-220ENST00000611869 MYOZ1Q9NP98 299 aaPredicted RBP11.27□□□□□ -0.6
TCF3-220ENST00000611869 ZNF705GA8MUZ8 300 aaPredicted RBP11.27□□□□□ -0.61
TCF3-220ENST00000611869 OR5G3P0C626 314 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 ZNF735P0CB33 412 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 HKR1P10072 659 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 TNFSF10P50591 281 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 GGNQ86UU5 652 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 FAM24BQ8N5W8 94 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 OR1L1Q8NH94 360 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 TVP23CQ96ET8 276 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 ACY3Q96HD9 319 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 REPIN1Q9BWE0 567 aaKnown RBP11.27□□□□□ -0.61
TCF3-220ENST00000611869 OR1A1Q9P1Q5 309 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 HEATR1Q9H583 2144 aaKnown RBP11.27□□□□□ -0.61
TCF3-220ENST00000611869 HBZP02008 142 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 CCL1P22362 96 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 SUB1P53999 127 aaKnown RBP eCLIP11.27□□□□□ -0.616e-7■□□□□ 10.7
TCF3-220ENST00000611869 H3F3AP84243 136 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 VWA1Q6PCB0 445 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 ISOC2Q96AB3 205 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 C1QTNF5Q9BXJ0 243 aa11.27□□□□□ -0.61
TCF3-220ENST00000611869 FOXD3Q9UJU5 478 aaPredicted RBP11.27□□□□□ -0.61
TCF3-220ENST00000611869 hADV38S2A0JD32 116 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 PPP1R2P9O14990 202 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 HRASP01112 189 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 SULT1A1P50225 295 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 DTD1Q8TEA8 209 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 NABP1Q96AH0 204 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 PKIBQ9C010 78 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 ZNF355PQ9NSJ1 428 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 RNF7Q9UBF6 113 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 ATPIF1Q9UII2 106 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 LY6G6EA0A0G2JKS1 128 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 A0A1B0GU03 582 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 PPP5D1E7EU14 171 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 SEC11BP0C7V7 166 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 HOXD11P31277 338 aaPredicted RBP11.26□□□□□ -0.61
TCF3-220ENST00000611869 NCR3LG1Q68D85 454 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 ZNF818PQ6ZRF7 136 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 RTN4RL2Q86UN3 420 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 POM121L2Q96KW2 1035 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 OR2V2Q96R30 315 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 RTBDNQ9BSG5 229 aaPredicted RBP11.26□□□□□ -0.61
TCF3-220ENST00000611869 WIPI2Q9Y4P8 454 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 U3KQA8 63 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 TRAV14DV4A0A0A6YYC5 116 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 RBFOX3A6NFN3 312 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 C16orf97H3BN30 126 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 PGLYRP1O75594 196 aaPredicted RBP11.26□□□□□ -0.61
TCF3-220ENST00000611869 CTSSP25774 331 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 RAB7AP51149 207 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 CSRP2Q16527 193 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 FAM166AQ6J272 317 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 STPG2Q8N412 459 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 POC1AQ8NBT0 407 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 OR8G5Q8NG78 346 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 OR5P3Q8WZ94 311 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 AQP10Q96PS8 301 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 SAP30LQ9HAJ7 183 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 MTCH1Q9NZJ7 389 aa11.26□□□□□ -0.61
TCF3-220ENST00000611869 ARG1P05089 322 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 LY6G6FQ5SQ64 297 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 TP53RKQ96S44 253 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 LRFN3Q9BTN0 628 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 CELA3BP08861 270 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 TMEM187Q14656 261 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 GUCA2BQ16661 112 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 TMEM41BQ5BJD5 291 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 FBLN5Q9UBX5 448 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 ABCA4P78363 2273 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 IGKV1D-8A0A087WSZ0 117 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 A0A1W2PPQ1 181 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 MFSD2BA6NFX1 497 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 ZNF705FA8MVS1 300 aaPredicted RBP11.25□□□□□ -0.61
TCF3-220ENST00000611869 ZNF705DP0CH99 300 aaPredicted RBP11.25□□□□□ -0.61
TCF3-220ENST00000611869 ZNF705BP0CI00 300 aaPredicted RBP11.25□□□□□ -0.61
TCF3-220ENST00000611869 MUC1P15941 1255 aaPredicted RBP11.25□□□□□ -0.61
TCF3-220ENST00000611869 ID4P47928 161 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 AWAT1Q58HT5 328 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 FAM209AQ5JX71 171 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 Q6ZT83 130 aa11.25□□□□□ -0.61
TCF3-220ENST00000611869 CORO2AQ92828 525 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms