RNA–Protein interactions for RNA: ENST00000608720.5

CTCFL-219, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best)

Gene CTCFL, Length 2,241 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-219ENST00000608720 OR10G4Q8NGN3 311 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 APOBEC3DQ96AK3 386 aaPredicted RBP12.53□□□□□ -0.4
CTCFL-219ENST00000608720 HS3ST6Q96QI5 342 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 HIST1H2AAQ96QV6 131 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 DDA1Q9BW61 102 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 RNF115Q9Y4L5 304 aa12.53□□□□□ -0.4
CTCFL-219ENST00000608720 IGKV1-6A0A0C4DH72 117 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 C5orf49A4QMS7 147 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 RPS18P62269 152 aaKnown RBP12.52□□□□□ -0.41
CTCFL-219ENST00000608720 ZNF429Q86V71 674 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 FAM210BQ96KR6 192 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 GPHA2Q96T91 129 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 NIPSNAP3BQ9BS92 247 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 SDK2Q58EX2 2172 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 TRBV6-6A0A0A6YYG2 114 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 A0A1B0GU03 582 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 MARCH11A6NNE9 402 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 SLC25A6P12236 298 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 EPHA1P21709 976 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 F2RP25116 425 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 PAX9P55771 341 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 RPL23AP62750 156 aaKnown RBP12.52□□□□□ -0.41
CTCFL-219ENST00000608720 ZNF154Q13106 437 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 COA6Q5JTJ3 125 aaKnown RBP12.52□□□□□ -0.41
CTCFL-219ENST00000608720 SLC23A3Q6PIS1 610 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 CLDND2Q8NHS1 167 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 TAAR3PQ9P1P4 343 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 BOKQ9UMX3 212 aaPredicted RBP12.52□□□□□ -0.41
CTCFL-219ENST00000608720 WSB1Q9Y6I7 421 aa12.52□□□□□ -0.41
CTCFL-219ENST00000608720 TRBV24-1A0A075B6N3 115 aa12.51□□□□□ -0.41
CTCFL-219ENST00000608720 TRAV1-1A0A0B4J248 108 aa12.51□□□□□ -0.41
CTCFL-219ENST00000608720 PINLYPA6NC86 204 aa12.51□□□□□ -0.41
CTCFL-219ENST00000608720 HSPB6O14558 160 aa12.51□□□□□ -0.41
CTCFL-219ENST00000608720 IFNA5P01569 189 aa12.51□□□□□ -0.41
CTCFL-219ENST00000608720 SERPINA7P05543 415 aa12.51□□□□□ -0.41
CTCFL-219ENST00000608720 RNPS1Q15287 305 aaKnown RBP12.51□□□□□ -0.41
CTCFL-219ENST00000608720 PDZD11Q5EBL8 140 aa12.51□□□□□ -0.41
CTCFL-219ENST00000608720 PCSK4Q6UW60 755 aa12.51□□□□□ -0.41
CTCFL-219ENST00000608720 MRPL52Q86TS9 123 aaKnown RBP12.51□□□□□ -0.41
CTCFL-219ENST00000608720 MRPL30Q8TCC3 161 aaKnown RBP12.51□□□□□ -0.41
CTCFL-219ENST00000608720 CRIM1Q9NZV1 1036 aa12.51□□□□□ -0.41
CTCFL-219ENST00000608720 IL36RNQ9UBH0 155 aa12.51□□□□□ -0.41
CTCFL-219ENST00000608720 A0A096LPE4 126 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 A0A1W2PPZ6 126 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 B4E171 279 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 TSPAN7P41732 249 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 CEBPGP53567 150 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 RUNX1Q01196 453 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 PNRC1Q12796 327 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-219ENST00000608720 GAGE1Q13065 139 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 SSPNQ14714 243 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 RAB40CQ96S21 281 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 OR2W1Q9Y3N9 320 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 KIAA1549Q9HCM3 1950 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 TNFSF12O43508 249 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 HLA-HP01893 362 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 SERPINE2P07093 398 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 CCL2P13500 99 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 ZNF324BQ6AW86 544 aaPredicted RBP12.5□□□□□ -0.41
CTCFL-219ENST00000608720 CYB561D1Q8N8Q1 229 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 PSMF1Q92530 271 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 PRRG4Q9BZD6 226 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 CDH20Q9HBT6 801 aa12.5□□□□□ -0.41
CTCFL-219ENST00000608720 H0YL77 283 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 SS18L1O75177 396 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-219ENST00000608720 NXPH3O95157 252 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 SNRPCP09234 159 aaKnown RBP12.49□□□□□ -0.41
CTCFL-219ENST00000608720 WNT2P09544 360 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 DCAF12Q5T6F0 453 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 C9orf135Q5VTT2 229 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 OR10J5Q8NHC4 309 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 GPR146Q96CH1 333 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 GPR87Q9BY21 358 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 OR14J1Q9UGF5 321 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 SYNGR1O43759 233 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 MBP02144 154 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 METTL15P1P0C7V9 234 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 ARR3P36575 388 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 SLC25A24Q6NUK1 477 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 ZNF880Q6PDB4 577 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 ZNF573Q86YE8 665 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 THNSL2Q86YJ6 484 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 H1FOOQ8IZA3 346 aaPredicted RBP12.49□□□□□ -0.41
CTCFL-219ENST00000608720 OR5P3Q8WZ94 311 aa12.49□□□□□ -0.41
CTCFL-219ENST00000608720 LRP5LA4QPB2 252 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 CD300LBA8K4G0 201 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 CLDN34H7C241 214 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 SLC33A1O00400 549 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-219ENST00000608720 EREGO14944 169 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 SYNGR4O95473 234 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 CNOT4O95628 575 aaKnown RBP12.48□□□□□ -0.41
CTCFL-219ENST00000608720 CER1O95813 267 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 IL18BPO95998 194 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 HLA-DRB3P79483 266 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 SRYQ05066 204 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 C20orf204Q6ZNR8 217 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 TUSC5Q8IXB3 177 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 CABLES2Q9BTV7 478 aa12.48□□□□□ -0.41
CTCFL-219ENST00000608720 ZNF552Q9H707 407 aaPredicted RBP12.48□□□□□ -0.41
CTCFL-219ENST00000608720 CALHM2Q9HA72 323 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms