RNA–Protein interactions for RNA: ENST00000602029.1

VRK3-226, Transcript of vaccinia related kinase 3, humanhuman

TSL 2

Gene VRK3, Length 578 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-226ENST00000602029 A0A1B0GWJ7 208 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 DHRS7CA6NNS2 312 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 ZNF732B4DXR9 585 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 SIGLEC5O15389 551 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 CA11O75493 328 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 SRSF10O75494 262 aaKnown RBP4.21□□□□□ -1.74
VRK3-226ENST00000602029 B3GALNT1O75752 331 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 NXPH2O95156 264 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 CYB5AP00167 134 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 LHBP01229 141 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 CD74P04233 296 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 CHRM2P08172 466 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 ACAA1P09110 424 aaPredicted RBP4.21□□□□□ -1.74
VRK3-226ENST00000602029 RRASP10301 218 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 RPA2P15927 270 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 CCL3L1P16619 93 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 HLA-GP17693 338 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 HTR2CP28335 458 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 HOXD3P31249 432 aaPredicted RBP4.21□□□□□ -1.74
VRK3-226ENST00000602029 ECI1P42126 302 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 KIR3DL2P43630 455 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 CBX5P45973 191 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 POU3F4P49335 361 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 VEGFCP49767 419 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 P2RX3P56373 397 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 TAS2R31P59538 309 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 ARPC4P59998 168 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 FAM3AP98173 230 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 EDDM3AQ14507 147 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 TMEM95Q3KNT9 176 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 C6orf183Q5T699 404 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 KPRPQ5T749 579 aaPredicted RBP4.21□□□□□ -1.74
VRK3-226ENST00000602029 HES5Q5TA89 166 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 TMEM65Q6PI78 240 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 HAGHLQ6PII5 290 aaPredicted RBP4.21□□□□□ -1.74
VRK3-226ENST00000602029 MOB3CQ70IA8 216 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 LHFPL4Q7Z7J7 247 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 SERPINA12Q8IW75 414 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 PRSS35Q8N3Z0 413 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 EIF4E3Q8N5X7 224 aaKnown RBP4.21□□□□□ -1.74
VRK3-226ENST00000602029 LY6G5BQ8NDX9 201 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 OR5AU1Q8NGC0 362 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 OR4X2Q8NGF9 303 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 OR13C5Q8NGS8 318 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 OR13D1Q8NGV5 346 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 OR2T35Q8NGX2 323 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 LRRC20Q8TCA0 184 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 RNF133Q8WVZ7 376 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 FAM3DQ96BQ1 224 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 SGK3Q96BR1 496 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 PHYHIPLQ96FC7 376 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 CPNE2Q96FN4 548 aaPredicted RBP4.21□□□□□ -1.74
VRK3-226ENST00000602029 AKR1E2Q96JD6 320 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 OCSTAMPQ9BR26 566 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 DNTTIP1Q9H147 329 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 AUNIPQ9H7T9 357 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 PLSCR3Q9NRY6 295 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 C19orf12Q9NSK7 152 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 MGAT4CQ9UBM8 478 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 GLS2Q9UI32 602 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 RAB22AQ9UL26 194 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 MRPS7Q9Y2R9 242 aaKnown RBP4.21□□□□□ -1.74
VRK3-226ENST00000602029 LRP12Q9Y561 859 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 HILPDAQ9Y5L2 63 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 MPC1Q9Y5U8 109 aa4.21□□□□□ -1.74
VRK3-226ENST00000602029 FRAS1Q86XX4 4008 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 A0A0D9SG52 128 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 RFPL4AA6NLU0 287 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 DISC1C4P0D8 188 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 KRBOX1C9JBD0 128 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 RFPL4AL1F8VTS6 287 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP4.2□□□□□ -1.74
VRK3-226ENST00000602029 L7N2F9 121 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ARPC1BO15143 372 aaKnown RBP4.2□□□□□ -1.74
VRK3-226ENST00000602029 BET1O15155 118 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 LDLRAD4O15165 306 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 MAGEB4O15481 346 aaPredicted RBP4.2□□□□□ -1.74
VRK3-226ENST00000602029 FCN3O75636 299 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 RHBDL1O75783 438 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 PTBP3O95758 552 aaKnown RBP4.2□□□□□ -1.74
VRK3-226ENST00000602029 MT-ND4P03905 459 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 GSTP1P09211 210 aaKnown RBP4.2□□□□□ -1.74
VRK3-226ENST00000602029 PSG2P11465 335 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 CCL1P22362 96 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ANOS1P23352 680 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 NFYAP23511 347 aaPredicted RBP4.2□□□□□ -1.74
VRK3-226ENST00000602029 S100A11P31949 105 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 PRDX2P32119 198 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 CEBPDP49716 269 aaPredicted RBP4.2□□□□□ -1.74
VRK3-226ENST00000602029 CCR6P51684 374 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ARHGDIBP52566 201 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 HCCSP53701 268 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 ZP1P60852 638 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 PSMA6P60900 246 aaKnown RBP4.2□□□□□ -1.74
VRK3-226ENST00000602029 GNG3P63215 75 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 PNLIPRP3Q17RR3 467 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 KRTAP27-1Q3LI81 207 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 Q5BKY6 102 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 NHLRC3Q5JS37 347 aa4.2□□□□□ -1.74
VRK3-226ENST00000602029 LIN54Q6MZP7 749 aa4.2□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 47.8 ms