RNA–Protein interactions for RNA: ENST00000601341.5

VRK3-223, Transcript of vaccinia related kinase 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene VRK3, Length 1,777 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-223ENST00000601341 SYNGR1O43759 233 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 GPR137BO60478 399 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 DIRAS3O95661 229 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 PPYP01298 95 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 WNT2P09544 360 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 TNFSF4P23510 183 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 LOXP28300 417 aaPredicted RBP9.85□□□□□ -0.83
VRK3-223ENST00000601341 CD200P41217 278 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 NPBWR2P48146 333 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 TMEM33P57088 247 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 DAZAP2Q15038 168 aaPredicted RBP9.85□□□□□ -0.83
VRK3-223ENST00000601341 ZNF672Q499Z4 452 aaPredicted RBP9.85□□□□□ -0.83
VRK3-223ENST00000601341 RPL7L1Q6DKI1 246 aaKnown RBP9.85□□□□□ -0.83
VRK3-223ENST00000601341 ATRAIDQ6UW56 229 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 NEUROG1Q92886 237 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 CYYR1Q96J86 154 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 HS3ST6Q96QI5 342 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 DIRC2Q96SL1 478 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 SPIN2AQ99865 258 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 SPIN2BQ9BPZ2 258 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 TLNRD1Q9H1K6 362 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 IFT22Q9H7X7 185 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 UQCC1Q9NVA1 299 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 FAM208BQ5VWN6 2430 aa9.85□□□□□ -0.83
VRK3-223ENST00000601341 CLEC18AA5D8T8 446 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 C19orf84I3L1E1 186 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 MPPED1O15442 326 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 SPRY3O43610 288 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 OR7C1O76099 320 aaPredicted RBP9.84□□□□□ -0.83
VRK3-223ENST00000601341 PTBP3O95758 552 aaKnown RBP9.84□□□□□ -0.83
VRK3-223ENST00000601341 PLAUP00749 431 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 MBPP02686 304 aaPredicted RBP9.84□□□□□ -0.83
VRK3-223ENST00000601341 TK1P04183 234 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 HEXAP06865 529 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 ACAA1P09110 424 aaPredicted RBP9.84□□□□□ -0.83
VRK3-223ENST00000601341 IGFBP2P18065 325 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 BCL3P20749 454 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 KCNJ3P48549 501 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 HMGN3Q15651 99 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 EFNB3Q15768 340 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 BTNL8Q6UX41 500 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 Q8IYB0 196 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 CLEC18CQ8NCF0 446 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 OR4A4PQ8NGN8 299 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 IL22RA2Q969J5 263 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 TOMM40LQ969M1 308 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 TMEM56Q96MV1 263 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 Q9N2K0 584 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 FBXL17Q9UF56 701 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 TMEM56-RWDD3S4R434 201 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 HCFC1P51610 2035 aa9.84□□□□□ -0.83
VRK3-223ENST00000601341 IGHV3-64DA0A0J9YX35 117 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 A6NLC8 198 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 B9A039 149 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 RHBDL1O75783 438 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 TUSC2O75896 110 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 CD5P06127 495 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 ADH4P08319 380 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 MMP9P14780 707 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 DHRS7BQ6IAN0 325 aaPredicted RBP9.83□□□□□ -0.84
VRK3-223ENST00000601341 LILRB1Q8NHL6 650 aaPredicted RBP9.83□□□□□ -0.84
VRK3-223ENST00000601341 OR2V2Q96R30 315 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 GINS3Q9BRX5 216 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 TMEM222Q9H0R3 208 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 OR2S2Q9NQN1 319 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 IL19Q9UHD0 177 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 KLF2Q9Y5W3 355 aaPredicted RBP9.83□□□□□ -0.84
VRK3-223ENST00000601341 CHD6Q8TD26 2715 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 DOPEY1Q5JWR5 2465 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 ROS1P08922 2347 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 C3orf85A0A1B0GTC6 90 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 C17orf100A8MU93 164 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 F8W036 122 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 IGHV1-46P01743 117 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 PGA5P0DJD9 388 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 ADCYAP1P18509 176 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 AADACP22760 399 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 DVL1P1P54792 670 aaPredicted RBP9.83□□□□□ -0.84
VRK3-223ENST00000601341 TNFAIP6P98066 277 aaPredicted RBP9.83□□□□□ -0.84
VRK3-223ENST00000601341 FLI1Q01543 452 aaPredicted RBP9.83□□□□□ -0.84
VRK3-223ENST00000601341 GNMTQ14749 295 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 PRAMEF6Q5VXH4 476 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 C11orf53Q8IXP5 236 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 PUSL1Q8N0Z8 303 aaKnown RBP9.83□□□□□ -0.84
VRK3-223ENST00000601341 FAM58AQ8N1B3 248 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 OR4D5Q8NGN0 318 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 MEGF10Q96KG7 1140 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 NRIP2Q9BQI9 281 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 MS4A5Q9H3V2 200 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 UFSP2Q9NUQ7 469 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 TREM2Q9NZC2 230 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 ZNF581Q9P0T4 197 aa9.83□□□□□ -0.84
VRK3-223ENST00000601341 STRAPQ9Y3F4 350 aaKnown RBP9.83□□□□□ -0.84
VRK3-223ENST00000601341 GPR31O00270 319 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 FBXO24O75426 580 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 MED6O75586 246 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 DANCRP0C864 163 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 SPP1P10451 314 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 PRKACAP17612 351 aa9.82□□□□□ -0.84
VRK3-223ENST00000601341 PAX6P26367 422 aa9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms