RNA–Protein interactions for RNA: ENST00000601150.5

TRIM28-215, Transcript of tripartite motif containing 28, humanhuman

TSL 3

Gene TRIM28, Length 915 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM28-215ENST00000601150 ARHGAP5-AS1Q96IT6 56 aa13.54□□□□□ -0.24
TRIM28-215ENST00000601150 OCSTAMPQ9BR26 566 aa13.54□□□□□ -0.24
TRIM28-215ENST00000601150 PECRQ9BY49 303 aa13.54□□□□□ -0.24
TRIM28-215ENST00000601150 RNF167Q9H6Y7 350 aa13.54□□□□□ -0.24
TRIM28-215ENST00000601150 ABRACLQ9P1F3 81 aa13.54□□□□□ -0.24
TRIM28-215ENST00000601150 TRBV6-6A0A0A6YYG2 114 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 TRIM64CA6NLI5 447 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 KIR2DS4P43632 304 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 HTD2P86397 168 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 HMGN3Q15651 99 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 PLAC9Q5JTB6 97 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 OR8H3Q8N146 312 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 ZNF439Q8NDP4 499 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 OR10V1Q8NGI7 309 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 PTX4Q96A99 478 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 GALMQ96C23 342 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 RAB3CQ96E17 227 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 CENPOQ9BU64 300 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 C12orf4Q9NQ89 552 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 OR2S2Q9NQN1 319 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 DAPK2Q9UIK4 370 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 JPT1Q9UK76 154 aa13.53□□□□□ -0.24
TRIM28-215ENST00000601150 METTL21EPA6NDL7 271 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 CD24P25063 80 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 IL3RAP26951 378 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 PROK1P58294 105 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 MXD1Q05195 221 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 SFXN4Q6P4A7 337 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 Q6ZPA2 131 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 SLC25A48Q6ZT89 311 aaKnown RBP13.52□□□□□ -0.25
TRIM28-215ENST00000601150 C16orf82Q7Z2V1 217 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 C5orf24Q7Z6I8 188 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 OR10R2Q8NGX6 335 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 YIPF6Q96EC8 236 aa13.52□□□□□ -0.25
TRIM28-215ENST00000601150 CMSS1Q9BQ75 279 aaKnown RBP13.52□□□□□ -0.25
TRIM28-215ENST00000601150 HDHD3Q9BSH5 251 aaPredicted RBP13.52□□□□□ -0.25
TRIM28-215ENST00000601150 ANK2Q01484 3957 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 A0A1W2PPI3 338 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 HSD17B6O14756 317 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 TIMM23O14925 209 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 SLC31A2O15432 143 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 AIREO43918 545 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 GAPDHP04406 335 aaKnown RBP13.51□□□□□ -0.25
TRIM28-215ENST00000601150 CLEC2LP0C7M8 214 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 ZNF816Q0VGE8 651 aaPredicted RBP13.51□□□□□ -0.25
TRIM28-215ENST00000601150 DIAPH2-AS1Q14236 149 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 GNMTQ14749 295 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 MOGAT2Q3SYC2 334 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 MORN2Q502X0 79 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 CT45A1Q5HYN5 189 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 STEAP3Q658P3 488 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 OR52L2PQ8NGH6 319 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 OR2T6Q8NHC8 308 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 CT45A3Q8NHU0 189 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 CAPSLQ8WWF8 208 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 AKR1E2Q96JD6 320 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 ATG5Q9H1Y0 275 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 MGAT4AQ9UM21 535 aa13.51□□□□□ -0.25
TRIM28-215ENST00000601150 RAB27BO00194 218 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 YPEL1O60688 119 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 RGS11O94810 467 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 LPLP06858 475 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 CD3GP09693 182 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 FAM106CPP0CH98 169 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 PPP1CCP36873 323 aaKnown RBP13.5□□□□□ -0.25
TRIM28-215ENST00000601150 ZNF134P52741 427 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 MRPS15P82914 257 aaKnown RBP13.5□□□□□ -0.25
TRIM28-215ENST00000601150 LY6G6FQ5SQ64 297 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 C11orf88Q6PI97 169 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 THNSL2Q86YJ6 484 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 DRAM1Q8N682 238 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 OR56B4Q8NH76 319 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 IL1F10Q8WWZ1 152 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 CFHR4Q92496 578 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 ST6GALNAC6Q969X2 333 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 YPEL2Q96QA6 119 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 PRSS22Q9GZN4 317 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 Q9N2K0 584 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 KCNK7Q9Y2U2 307 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 SIGLEC9Q9Y336 463 aa13.5□□□□□ -0.25
TRIM28-215ENST00000601150 FAM90A9PA6NNJ1 464 aa13.49□□□□□ -0.25
TRIM28-215ENST00000601150 MFNGO00587 321 aa13.49□□□□□ -0.25
TRIM28-215ENST00000601150 OR2F2O95006 317 aa13.49□□□□□ -0.25
TRIM28-215ENST00000601150 SNRPBP14678 240 aaKnown RBP13.49□□□□□ -0.25
TRIM28-215ENST00000601150 HIST1H1DP16402 221 aaKnown RBP13.49□□□□□ -0.25
TRIM28-215ENST00000601150 REG1BP48304 166 aa13.49□□□□□ -0.25
TRIM28-215ENST00000601150 ZNF137PP52743 207 aa13.49□□□□□ -0.25
TRIM28-215ENST00000601150 HLA-DRB3P79483 266 aa13.49□□□□□ -0.25
TRIM28-215ENST00000601150 LGALS14Q8TCE9 139 aa13.49□□□□□ -0.25
TRIM28-215ENST00000601150 RTN4IP1Q8WWV3 396 aaPredicted RBP13.49□□□□□ -0.25
TRIM28-215ENST00000601150 RBM14Q96PK6 669 aaKnown RBP13.49□□□□□ -0.25
TRIM28-215ENST00000601150 SLC25A33Q9BSK2 321 aa13.49□□□□□ -0.25
TRIM28-215ENST00000601150 ZNF702PQ9H963 129 aa13.49□□□□□ -0.25
TRIM28-215ENST00000601150 IGHV1-3A0A0C4DH29 117 aa13.48□□□□□ -0.25
TRIM28-215ENST00000601150 SERPINE3A8MV23 424 aa13.48□□□□□ -0.25
TRIM28-215ENST00000601150 TXNL1O43396 289 aa13.48□□□□□ -0.25
TRIM28-215ENST00000601150 SNRNP70P08621 437 aaKnown RBP13.48□□□□□ -0.25
TRIM28-215ENST00000601150 GNB3P16520 340 aa13.48□□□□□ -0.25
TRIM28-215ENST00000601150 SCAND1P57086 179 aa13.48□□□□□ -0.25
TRIM28-215ENST00000601150 SRSF4Q08170 494 aaKnown RBP13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms