RNA–Protein interactions for RNA: ENST00000600274.5

ARHGEF1-220, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 3,439 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-220ENST00000600274 Q6ZSR3 168 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 FAM214BQ7L5A3 538 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 SSX9Q7RTT3 188 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 IL36GQ9NZH8 169 aa9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 RCC2Q9P258 522 aaKnown RBP9.81□□□□□ -0.84
ARHGEF1-220ENST00000600274 DEFA6Q01524 100 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 AESQ08117 197 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 SOHLH1Q5JUK2 328 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR10V1Q8NGI7 309 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 PLPPR1Q8TBJ4 325 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 MRPL30Q8TCC3 161 aaKnown RBP9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 SEC11CQ9BY50 192 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 MPC1Q9Y5U8 109 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 SMG1Q96Q15 3661 aaKnown RBP9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZGRF1Q86YA3 2104 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 ATRXP46100 2492 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 SMPD2O60906 423 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 FAM157CP0CG43 387 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 MDKP21741 143 aaPredicted RBP9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 CEACAM6P40199 344 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZNF83P51522 516 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 WDR86Q86TI4 376 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR5T1Q8NG75 326 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR5C1Q8NGR4 320 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 ABHD14AQ9BUJ0 271 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 TMEM222Q9H0R3 208 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 DCAF16Q9NXF7 216 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 ATP23Q9Y6H3 246 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 COL6A6A6NMZ7 2263 aa9.8□□□□□ -0.84
ARHGEF1-220ENST00000600274 CHST1O43916 411 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 SOX15O60248 233 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 UCP2P55851 309 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 STX12Q86Y82 276 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR2C3Q8N628 320 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZNF610Q8N9Z0 462 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 KLF14Q8TD94 323 aaPredicted RBP9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 GMPPAQ96IJ6 420 aaPredicted RBP9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 RNF122Q9H9V4 155 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 PLA2G2EQ9NZK7 142 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 ABCA4P78363 2273 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 TNRC6AQ8NDV7 1962 aaKnown RBP9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR5B21A6NL26 309 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 J3QT63 122 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR3A1P47881 315 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 EWSR1Q01844 656 aaKnown RBP eCLIP9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 IL15RAQ13261 267 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 MPV17LQ2QL34 196 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 SPINK9Q5DT21 86 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 BTNL3Q6UXE8 466 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 BEND4Q6ZU67 534 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR2G3Q8NGZ4 309 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 MRGPRDQ8TDS7 321 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 GALNT14Q96FL9 552 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 PLEKHA2Q9HB19 425 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 FAM212BQ9NTI7 297 aaPredicted RBP9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZDHHC8Q9ULC8 765 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 TMED3Q9Y3Q3 217 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR2C1O95371 312 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 IL2RGP31785 369 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 DHRS7BQ6IAN0 325 aaPredicted RBP9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 RPRMLQ8N4K4 120 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 RBMXL1Q96E39 390 aaKnown RBP9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 COA4Q9NYJ1 87 aa9.79□□□□□ -0.84
ARHGEF1-220ENST00000600274 TAAR5O14804 337 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 GPR137BO60478 399 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 NAPSAO96009 420 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 GCH1P30793 250 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 PMELP40967 661 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 LINC00205P59089 165 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 NAAAQ02083 359 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZNF816Q0VGE8 651 aaPredicted RBP9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 MST1LQ2TV78 715 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 NRN1LQ496H8 165 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 SELENOHQ8IZQ5 122 aaKnown RBP9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 HIST1H2BAQ96A08 127 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 C18orf12Q96KH6 178 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 TUBD1Q9UJT1 453 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 TRAV17A0A0B4J275 112 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 A0A0G2JRQ6 117 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 IGSF23A1L1A6 192 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 KLK10O43240 276 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 PGLYRP1O75594 196 aaPredicted RBP9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 COX5BP10606 129 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 HLA-DRB3P79483 266 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 HABP2Q14520 560 aaPredicted RBP9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 DCTN5Q9BTE1 182 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR51I2Q9H344 312 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 CACNG5Q9UF02 275 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 FGF16O43320 207 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 KRASP01116 189 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 FBP1P09467 338 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 TAGLN2P37802 199 aaKnown RBP9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 DYNLT3P51808 116 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 IL34Q6ZMJ4 242 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZNF561Q8N587 486 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR2Z1Q8NG97 314 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 OR1L1Q8NH94 360 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 SPIN2AQ99865 258 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 SPIN2BQ9BPZ2 258 aa9.78□□□□□ -0.84
ARHGEF1-220ENST00000600274 ZDHHC11Q9H8X9 412 aa9.78□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 95 ms