RNA–Protein interactions for RNA: ENST00000595803.5

SHKBP1-209, Transcript of SH3KBP1 binding protein 1, humanhuman

TSL 5

Gene SHKBP1, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHKBP1-209ENST00000595803 CLN8Q9UBY8 286 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 FLVCR2Q9UPI3 526 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 UBE2J1Q9Y385 318 aaPredicted RBP10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 ANK2Q01484 3957 aa10.8□□□□□ -0.68
SHKBP1-209ENST00000595803 IGKV1-6A0A0C4DH72 117 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 KBTBD11-OT1A0A1B0GTJ5 212 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 MEX3AA1L020 520 aaKnown RBP10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 ZNF729A6NN14 1252 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 C15orf65H3BRN8 121 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 PGAM2P15259 253 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 ZBTB25P24278 435 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 CEACAM6P40199 344 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 RAG2P55895 527 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 RAB25P57735 213 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 GNB2P62879 340 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 LTC4SQ16873 150 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 WDR25Q64LD2 544 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 TMEM200BQ69YZ2 307 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 ZNF841Q6ZN19 808 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 LHFPL1Q86WI0 220 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 CIARTQ8N365 385 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 ZDHHC22Q8N966 263 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 OR52L2PQ8NGH6 319 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 MARCH1Q8TCQ1 289 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 C20orf85Q9H1P6 137 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 C19orf12Q9NSK7 152 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 NUDT15Q9NV35 164 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 BEX4Q9NWD9 120 aaPredicted RBP10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 CALYQ9NYX4 217 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 ZNF69Q9UC07 566 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 SLC23A1Q9UHI7 598 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 LINC00312Q9Y6C7 94 aa10.79□□□□□ -0.68
SHKBP1-209ENST00000595803 TRBV23-1A0A0A0MS06 115 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 A0A1W2PPH5 198 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 OR5H14A6NHG9 310 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 FCN3O75636 299 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 CGB3P0DN86 165 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 CGB7P0DN87 165 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 AADACP22760 399 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 SSTR5P35346 364 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 FXYD4P59646 89 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 HTD2P86397 168 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 HERPUD1Q15011 391 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 ESCO2Q56NI9 601 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 CD276Q5ZPR3 534 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 ZNF660Q6AZW8 331 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 LPCAT3Q6P1A2 487 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 H1FOOQ8IZA3 346 aaPredicted RBP10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 ZFAND1Q8TCF1 268 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 C10orf105Q8TEF2 133 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 UPRTQ96BW1 309 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 BPESC1Q9GZL8 116 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 GAL3ST2Q9H3Q3 398 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 OR2S2Q9NQN1 319 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 IDI2-AS1Q9NZ38 188 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 OR1A1Q9P1Q5 309 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 GPR132Q9UNW8 380 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 RBM7Q9Y580 266 aaKnown RBP10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 USF3Q68DE3 2245 aa10.78□□□□□ -0.68
SHKBP1-209ENST00000595803 hCG_2014768A0A024R1R8 64 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 A0A1B0GVG6 124 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 NPIPB11E5RHQ5 1161 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 F5H0A9 414 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 PPYP01298 95 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 ZNF728P0DKX0 622 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 FPR2P25090 351 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 UCP3P55916 312 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 SURF2Q15527 256 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 C17orf58Q2M2W7 97 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 KIAA2026Q5HYC2 2103 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 AADACL3Q5VUY0 350 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 TMED4Q7Z7H5 227 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 TOMM40LQ969M1 308 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 MOB3AQ96BX8 217 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 ZNF714Q96N38 554 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 SSBP3Q9BWW4 388 aaPredicted RBP10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 BEX2Q9BXY8 128 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 BEX1Q9HBH7 125 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 RDH8Q9NYR8 311 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 C14orf166Q9Y224 244 aaKnown RBP10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 OR2W1Q9Y3N9 320 aa10.77□□□□□ -0.69
SHKBP1-209ENST00000595803 LOC105371242A0A075B767 164 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 IGHV3-43A0A0B4J1X8 118 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 PPIAL4CA0A0B4J2A2 164 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 F2RL2O00254 374 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 SMAD7O15105 426 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 PRAF2O60831 178 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 PEX14O75381 377 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 TUSC2O75896 110 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 RGS11O94810 467 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 PPIAL4GP0DN37 164 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 IGHV3-43DP0DP04 118 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 ANXA7P20073 488 aaKnown RBP10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 LUMP51884 338 aaPredicted RBP10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 ZNF273Q14593 569 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 CLEC12BQ2HXU8 276 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 C11orf91Q3C1V1 193 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 TMEM30BQ3MIR4 351 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 OR10A7Q8NGE5 316 aa10.76□□□□□ -0.69
SHKBP1-209ENST00000595803 OR10V1Q8NGI7 309 aa10.76□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 280 ms