RNA–Protein interactions for RNA: ENST00000595242.3

SCAF1-202, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS ALT2 TSL 3

Gene SCAF1, Length 463 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-202ENST00000595242 DHRS2Q13268 280 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 IL13RA2Q14627 380 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 Q5BKY6 102 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 FAM209AQ5JX71 171 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 AADACL3Q5VUY0 350 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 OR2T2Q6IF00 324 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 BRD3OSQ6XYD6 125 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 ASCC1Q8N9N2 400 aaKnown RBP10.57□□□□□ -0.72
SCAF1-202ENST00000595242 OR11H4Q8NGC9 324 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 OR13G1Q8NGZ3 307 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 SLC25A40Q8TBP6 338 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 MARS2Q96GW9 593 aaKnown RBP10.57□□□□□ -0.72
SCAF1-202ENST00000595242 CMSS1Q9BQ75 279 aaKnown RBP10.57□□□□□ -0.72
SCAF1-202ENST00000595242 TMEM246Q9BRR3 403 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 FAAP24Q9BTP7 215 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 RTL8AQ9BWD3 113 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 OR51I2Q9H344 312 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 IFT22Q9H7X7 185 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 PATZ1Q9HBE1 687 aaKnown RBP10.57□□□□□ -0.72
SCAF1-202ENST00000595242 MTCH1Q9NZJ7 389 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 ZNF581Q9P0T4 197 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 ANXA10Q9UJ72 324 aa10.57□□□□□ -0.72
SCAF1-202ENST00000595242 IGKV1D-8A0A087WSZ0 117 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 A0A0B4J2A0 478 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 C9orf170A2RU37 121 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 A8MXK9 166 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 SPRY3O43610 288 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 IGHV1-46P01743 117 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 IGHV2-70P01814 119 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 OPN1MWP04001 364 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 ACAA1P09110 424 aaPredicted RBP10.56□□□□□ -0.72
SCAF1-202ENST00000595242 GSTT2P0CG29 244 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 OPN1MW2P0DN77 364 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 OPN1MW3P0DN78 364 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 KITLGP21583 273 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 RPL15P61313 204 aaKnown RBP10.56□□□□□ -0.72
SCAF1-202ENST00000595242 ZNF660Q6AZW8 331 aaPredicted RBP10.56□□□□□ -0.72
SCAF1-202ENST00000595242 C11orf87Q6NUJ2 197 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 TMED4Q7Z7H5 227 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 TMEM86BQ8N661 226 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 OR1J1Q8NGS3 322 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 OR2T35Q8NGX2 323 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 MARCH1Q8TCQ1 289 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 MITD1Q8WV92 249 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 SLAMF9Q96A28 289 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 MICU1Q9BPX6 476 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 HDHD3Q9BSH5 251 aaPredicted RBP10.56□□□□□ -0.72
SCAF1-202ENST00000595242 ST6GALNAC5Q9BVH7 336 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 BCL2L14Q9BZR8 327 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 OR2J1Q9GZK6 312 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 C12orf4Q9NQ89 552 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 EHFQ9NZC4 300 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 SHPKQ9UHJ6 478 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 MGAT4AQ9UM21 535 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 BOLA1Q9Y3E2 137 aa10.56□□□□□ -0.72
SCAF1-202ENST00000595242 TMEM210A6NLX4 147 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 F5H5P2 479 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 SYNGR1O43759 233 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 DUS4LO95620 317 aaKnown RBP10.55□□□□□ -0.72
SCAF1-202ENST00000595242 IGHV3-13P01766 116 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 HLA-AP01891 365 aaKnown RBP10.55□□□□□ -0.72
SCAF1-202ENST00000595242 CA6P23280 308 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 H2BFSP57053 126 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 ERVK11-1P61568 191 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 PPP1R1AQ13522 171 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 ESCO2Q56NI9 601 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 TMEM128Q5BJH2 165 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 LY6G6FQ5SQ64 297 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 MBNL2Q5VZF2 373 aaKnown RBP10.55□□□□□ -0.72
SCAF1-202ENST00000595242 WDR86Q86TI4 376 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 Q8IYB0 196 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 BHLHE23Q8NDY6 225 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 OR5M8Q8NGP6 311 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 DYRK2Q92630 601 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 TMEM230Q96A57 120 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 EGLN1Q9GZT9 426 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 C5orf66Q9H5L9 145 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 ZNF286AQ9HBT8 521 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 SPACA1Q9HBV2 294 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 DCAF16Q9NXF7 216 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 ZNF230Q9UIE0 474 aaPredicted RBP10.55□□□□□ -0.72
SCAF1-202ENST00000595242 POMT1Q9Y6A1 747 aa10.55□□□□□ -0.72
SCAF1-202ENST00000595242 TRBV6-6A0A0A6YYG2 114 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 DBX1A6NMT0 343 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 GOSR2O14653 212 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 SLC22A5O76082 557 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 NAPSAO96009 420 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 CD34P28906 385 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 ARPC4P59998 168 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 TSPAN5P62079 268 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 PSG7Q13046 419 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 NDUFA5Q16718 116 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 TMEM155Q4W5P6 130 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 SPATA46Q5T0L3 261 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 HAGHLQ6PII5 290 aaPredicted RBP10.54□□□□□ -0.72
SCAF1-202ENST00000595242 DHRS11Q6UWP2 260 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 BTNL3Q6UXE8 466 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 ADAD2Q8NCV1 583 aaKnown RBP10.54□□□□□ -0.72
SCAF1-202ENST00000595242 OR8G5Q8NG78 346 aa10.54□□□□□ -0.72
SCAF1-202ENST00000595242 KLF14Q8TD94 323 aaPredicted RBP10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms