RNA–Protein interactions for RNA: ENST00000594948.5

VRK3-209, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 2 BASIC

Gene VRK3, Length 1,847 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-209ENST00000594948 CRIM1Q9NZV1 1036 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 IL36RNQ9UBH0 155 aa11.26□□□□□ -0.61
VRK3-209ENST00000594948 ERRFI1Q9UJM3 462 aaPredicted RBP11.26□□□□□ -0.61
VRK3-209ENST00000594948 TRAV24A0A0B4J272 114 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 CCDC163A0A0D9SF12 145 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 MAP1LC3B2A6NCE7 125 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 TSTD3H0UI37 97 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 SYNGR1O43759 233 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 HLA-HP01893 362 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 ARR3P36575 388 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 GNG3P63215 75 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 HLA-BQ31612 363 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 LCN15Q6UWW0 184 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 C20orf204Q6ZNR8 217 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 TMEM183AQ8IXX5 376 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 FAM58AQ8N1B3 248 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 OR51H1Q8NH63 302 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 C14orf144Q96I85 54 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 MAP1LC3BQ9GZQ8 125 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 VSIRQ9H7M9 311 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 DLL3Q9NYJ7 618 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 XIRP2A4UGR9 3374 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 SMCO3A2RU48 225 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 CEBPZOSA8MTT3 80 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 TMEM250H0YL14 139 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 GDF9O60383 454 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 TRAPPC6AO75865 159 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 IGKV1-5P01602 117 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 PFN1P07737 140 aaKnown RBP11.25□□□□□ -0.61
VRK3-209ENST00000594948 FABP4P15090 132 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 GDF1P27539 372 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 ARL16Q0P5N6 197 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 PPP1R32Q7Z5V6 425 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 LILRB2Q8N423 598 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 TAF15Q92804 592 aaKnown RBP eCLIP11.25□□□□□ -0.61
VRK3-209ENST00000594948 S100PBPQ96BU1 408 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 PACRGQ96M98 296 aaPredicted RBP11.25□□□□□ -0.61
VRK3-209ENST00000594948 HIST1H2BLQ99880 126 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 TMEM9BQ9NQ34 198 aa11.25□□□□□ -0.61
VRK3-209ENST00000594948 CHD3Q12873 2000 aaKnown RBP11.25□□□□□ -0.61
VRK3-209ENST00000594948 C5orf49A4QMS7 147 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 ANKRD30BLA7E2S9 258 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 RNF212BA8MTL3 300 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 MKRN2OSH3BPM6 223 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 SLC33A1O00400 549 aaPredicted RBP11.24□□□□□ -0.61
VRK3-209ENST00000594948 KBTBD11O94819 623 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 IGLV2-14P01704 120 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 METTL15P1P0C7V9 234 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 PGA5P0DJD9 388 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 RD3LP0DJH9 198 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 DDTP30046 118 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 DUSP3P51452 185 aaPredicted RBP11.24□□□□□ -0.61
VRK3-209ENST00000594948 GAMTQ14353 236 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 JOSD1Q15040 202 aaPredicted RBP11.24□□□□□ -0.61
VRK3-209ENST00000594948 ATP6V1FQ16864 119 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 LBHQ53QV2 105 aaPredicted RBP11.24□□□□□ -0.61
VRK3-209ENST00000594948 NCR3LG1Q68D85 454 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 TMEM14EPQ6UXP3 125 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 SSX7Q7RTT5 188 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 POM121L2Q96KW2 1035 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 SMOC1Q9H4F8 434 aa11.24□□□□□ -0.61
VRK3-209ENST00000594948 UBE2ZQ9H832 354 aaPredicted RBP11.24□□□□□ -0.61
VRK3-209ENST00000594948 BOKQ9UMX3 212 aaPredicted RBP11.24□□□□□ -0.61
VRK3-209ENST00000594948 ARHGAP21Q5T5U3 1957 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 J3QT63 122 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 HSPB6O14558 160 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 ZNF737O75373 536 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 MBP02144 154 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 IAPPP10997 89 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 CCL4P13236 92 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 MEF2BQ02080 365 aaPredicted RBP11.23□□□□□ -0.61
VRK3-209ENST00000594948 TESK1Q15569 626 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 TMEM241Q24JQ0 296 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 ZNF585BQ52M93 769 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 Q6P435 159 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 OR4X1Q8NH49 305 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 OR4C12Q96R67 309 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 ZNF552Q9H707 407 aaPredicted RBP11.23□□□□□ -0.61
VRK3-209ENST00000594948 DEPPQ9NTK1 212 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 PRSS50Q9UI38 385 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 PILRBQ9UKJ0 227 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 ATXN7O15265 892 aaPredicted RBP11.23□□□□□ -0.61
VRK3-209ENST00000594948 IL2RGP31785 369 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 FGF8P55075 233 aaPredicted RBP11.23□□□□□ -0.61
VRK3-209ENST00000594948 SLC38A11Q08AI6 406 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 Q0VFX4 171 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 SLC23A3Q6PIS1 610 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 RDH5Q92781 318 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 LHX4Q969G2 390 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 ACY3Q96HD9 319 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 SMIM7Q9BQ49 75 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 PRRG4Q9BZD6 226 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 ACTR3CQ9C0K3 210 aaPredicted RBP11.23□□□□□ -0.61
VRK3-209ENST00000594948 MANBALQ9NQG1 85 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 SLC39A9Q9NUM3 307 aa11.23□□□□□ -0.61
VRK3-209ENST00000594948 ESPL1Q14674 2120 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 CTXND1A0A1B0GTU2 59 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 HS3ST1O14792 307 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 SERPINA7P05543 415 aa11.22□□□□□ -0.61
VRK3-209ENST00000594948 FGF7P21781 194 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms