RNA–Protein interactions for RNA: ENST00000592060.5

MBD1-227, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best)

Gene MBD1, Length 1,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-227ENST00000592060 DANCRP0C864 163 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 MUC1P15941 1255 aaPredicted RBP13.24□□□□□ -0.29
MBD1-227ENST00000592060 OR3A1P47881 315 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 ID4P47928 161 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 F2RL1P55085 397 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 TMEM252Q8N6L7 170 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 OR1L1Q8NH94 360 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 UFSP2Q9NUQ7 469 aa13.24□□□□□ -0.29
MBD1-227ENST00000592060 RIF1Q5UIP0 2472 aaKnown RBP13.24□□□□□ -0.29
MBD1-227ENST00000592060 A0A1B0GU03 582 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 KIAA1324LA8MWY0 1029 aaPredicted RBP13.23□□□□□ -0.29
MBD1-227ENST00000592060 C12orf77C9JDV5 145 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 CRYABP02511 175 aaKnown RBP13.23□□□□□ -0.29
MBD1-227ENST00000592060 TFF1P04155 84 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 SERPINE2P07093 398 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 CEACAM6P40199 344 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 TIMM23BQ5SRD1 257 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 S100PBPQ96BU1 408 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 NKX6-2Q9C056 277 aaPredicted RBP13.23□□□□□ -0.29
MBD1-227ENST00000592060 SLC25A31Q9H0C2 315 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 SH3BGRL3Q9H299 93 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 UQCC1Q9NVA1 299 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 METRNQ9UJH8 293 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 KCNS2Q9ULS6 477 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 PPP1R3CQ9UQK1 317 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 FAM96BQ9Y3D0 163 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 IFNL4K9M1U5 179 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 OR8U9P0C7N5 309 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 TIMP3P35625 211 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 ASCL1P50553 236 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 ZNF83P51522 516 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 PAX9P55771 341 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 VAMP2P63027 116 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 TAGLNQ01995 201 aaKnown RBP13.23□□□□□ -0.29
MBD1-227ENST00000592060 GUCA2BQ16661 112 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 SMIM21Q3B7S5 101 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 C3orf36Q3SXR2 165 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 ZNF585BQ52M93 769 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 ZNF295-AS1Q8N0V1 137 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 SPAG16Q8N0X2 631 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 DRAM1Q8N682 238 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 OR8U1Q8NH10 309 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 LSM10Q969L4 123 aaKnown RBP13.23□□□□□ -0.29
MBD1-227ENST00000592060 TSNAXQ99598 290 aaKnown RBP13.23□□□□□ -0.29
MBD1-227ENST00000592060 TOLLIPQ9H0E2 274 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 TREM1Q9NP99 234 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 KCNIP1Q9NZI2 227 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 LUZP4Q9P127 313 aa13.23□□□□□ -0.29
MBD1-227ENST00000592060 FRYQ5TBA9 3013 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 OOEPA6NGQ2 149 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 GFRA3O60609 400 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 NXPH3O95157 252 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 IGKV1-5P01602 117 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 EPHA1P21709 976 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 CD200P41217 278 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 AESQ08117 197 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 SWI5Q1ZZU3 235 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 PUSL1Q8N0Z8 303 aaKnown RBP13.22□□□□□ -0.29
MBD1-227ENST00000592060 SNIP1Q8TAD8 396 aaKnown RBP13.22□□□□□ -0.29
MBD1-227ENST00000592060 TMEM171Q8WVE6 324 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 LIN7CQ9NUP9 197 aaKnown RBP13.22□□□□□ -0.29
MBD1-227ENST00000592060 KIAA2026Q5HYC2 2103 aa13.22□□□□□ -0.29
MBD1-227ENST00000592060 HEATR1Q9H583 2144 aaKnown RBP13.22□□□□□ -0.29
MBD1-227ENST00000592060 CHST1O43916 411 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 CD5P06127 495 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 CEACAM8P31997 349 aaPredicted RBP13.21□□□□□ -0.29
MBD1-227ENST00000592060 COL10A1Q03692 680 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 MZT1Q08AG7 82 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 Q6ZRM9 215 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 LRP11Q86VZ4 500 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 SVBPQ8N300 66 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 HSD17B11Q8NBQ5 300 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 LRRC29Q8WV35 223 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 C5orf30Q96GV9 206 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 SEC11CQ9BY50 192 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 CACFD1Q9UGQ2 172 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 RBM7Q9Y580 266 aaKnown RBP13.21□□□□□ -0.29
MBD1-227ENST00000592060 FAM74A7A6NL05 159 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 F8W036 122 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 TSPAN4O14817 238 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 HBZP02008 142 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 EGR1P18146 543 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 PAX5Q02548 391 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 BAXQ07812 192 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 EIF4EBP1Q13541 118 aaPredicted RBP13.21□□□□□ -0.29
MBD1-227ENST00000592060 ZNF266Q14584 549 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 CLINT1Q14677 625 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 IZUMO4Q1ZYL8 232 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 FAM74A3Q4VXF1 159 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 FAM57AQ8TBR7 257 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 GALMQ96C23 342 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 SFXN3Q9BWM7 321 aa13.21□□□□□ -0.29
MBD1-227ENST00000592060 STRAPQ9Y3F4 350 aaKnown RBP13.21□□□□□ -0.29
MBD1-227ENST00000592060 SVILO95425 2214 aa13.2□□□□□ -0.3
MBD1-227ENST00000592060 FAM157AC9JC47 383 aa13.2□□□□□ -0.3
MBD1-227ENST00000592060 RNASEK-C17orf49H0YIS7 233 aa13.2□□□□□ -0.3
MBD1-227ENST00000592060 K7N7A8 449 aa13.2□□□□□ -0.3
MBD1-227ENST00000592060 M0R1B8 84 aa13.2□□□□□ -0.3
MBD1-227ENST00000592060 NUPL2O15504 423 aaKnown RBP13.2□□□□□ -0.3
MBD1-227ENST00000592060 RAB5CP51148 216 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms