RNA–Protein interactions for RNA: ENST00000590347.5

CIRBP-228, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 3,117 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-228ENST00000590347 TMEM238C9JI98 176 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 KBTBD11O94819 623 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 LTBRP36941 435 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 SLC35B1P78383 322 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 OR5L2Q8NGL0 311 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 OR51H1Q8NH63 302 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 SGMS2Q8NHU3 365 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 UBE2L5PA0A1B0GUS4 154 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 SERPINE3A8MV23 424 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 TRDCB7Z8K6 153 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 MS4A18H0YCH9 400 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 PAGE4O60829 102 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 SUMO1P63165 101 aaKnown RBP13.04□□□□□ -0.32
CIRBP-228ENST00000590347 MS4A18Q3C1V0 323 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 TGIF2LYQ8IUE0 185 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 OR5AU1Q8NGC0 362 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 OR2AE1Q8NHA4 323 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 MPPED1O15442 326 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 HYPMO75409 117 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 TCN2P20062 427 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 MDH2P40926 338 aaKnown RBP13.04□□□□□ -0.32
CIRBP-228ENST00000590347 COMPP49747 757 aaPredicted RBP13.04□□□□□ -0.32
CIRBP-228ENST00000590347 PAX9P55771 341 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 FAM19A2Q8N3H0 131 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 FAM89BQ8N5H3 189 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 BMFQ96LC9 184 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 PCED1AQ9H1Q7 454 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 HIPK2Q9H2X6 1198 aa13.04□□□□□ -0.32
CIRBP-228ENST00000590347 OTX2P32243 289 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 MPLP40238 635 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 TPPP2P59282 170 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 ZNF596Q8TC21 504 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 TIMM29Q9BSF4 260 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 C11orf1Q9H5F2 150 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 PIGLQ9Y2B2 252 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 MTCP1P56278 107 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 MSMO1Q15800 293 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 Q6ZPA2 131 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 ADPRHL1Q8NDY3 354 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 OR2V1Q8NHB1 315 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 MOB3AQ96BX8 217 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 NUDT11Q96G61 164 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 CD207Q9UJ71 328 aa13.03□□□□□ -0.32
CIRBP-228ENST00000590347 F6UZH7 168 aa13.02□□□□□ -0.32
CIRBP-228ENST00000590347 DXOO77932 396 aaKnown RBP13.02□□□□□ -0.32
CIRBP-228ENST00000590347 ZNF133P52736 654 aaPredicted RBP13.02□□□□□ -0.32
CIRBP-228ENST00000590347 RPL15P61313 204 aaKnown RBP13.02□□□□□ -0.32
CIRBP-228ENST00000590347 ARF1P84077 181 aaKnown RBP13.02□□□□□ -0.32
CIRBP-228ENST00000590347 SHBQ15464 509 aa13.02□□□□□ -0.32
CIRBP-228ENST00000590347 CISD2Q8N5K1 135 aaKnown RBP13.02□□□□□ -0.32
CIRBP-228ENST00000590347 RPP25LQ8N5L8 163 aaKnown RBP13.02□□□□□ -0.32
CIRBP-228ENST00000590347 OR8G5Q8NG78 346 aa13.02□□□□□ -0.32
CIRBP-228ENST00000590347 LYZL4Q96KX0 146 aa13.02□□□□□ -0.32
CIRBP-228ENST00000590347 CLUHP3Q96NS8 147 aa13.02□□□□□ -0.32
CIRBP-228ENST00000590347 SLC7A10Q9NS82 523 aa13.02□□□□□ -0.32
CIRBP-228ENST00000590347 SLC17A4Q9Y2C5 497 aa13.02□□□□□ -0.32
CIRBP-228ENST00000590347 WIPI2Q9Y4P8 454 aa13.02□□□□□ -0.32
CIRBP-228ENST00000590347 NTF3P20783 257 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 PPP1CBP62140 327 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 MRGPRGQ86SM5 289 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 GAPTQ8N292 157 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 ZNF738Q8NE65 137 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 UBALD1Q8TB05 177 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 ASB10Q8WXI3 467 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 FBLN5Q9UBX5 448 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 KIAA1324LA8MWY0 1029 aaPredicted RBP13.02□□□□□ -0.33
CIRBP-228ENST00000590347 SLC17A3O00476 420 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 CRISP2P16562 243 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 SELENOHQ8IZQ5 122 aaKnown RBP13.02□□□□□ -0.33
CIRBP-228ENST00000590347 SIGLEC12Q96PQ1 595 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 CLDN16Q9Y5I7 305 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 COX11Q9Y6N1 276 aa13.02□□□□□ -0.33
CIRBP-228ENST00000590347 FOXI3A8MTJ6 420 aaPredicted RBP13.01□□□□□ -0.33
CIRBP-228ENST00000590347 SIRPB1O00241 398 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 IL33O95760 270 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 NPPCP23582 126 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 DTYMKP23919 212 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 SPANXN5Q5MJ07 72 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 ZNF818PQ6ZRF7 136 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 SMIM15Q7Z3B0 74 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 PNPLA5Q7Z6Z6 429 aaPredicted RBP13.01□□□□□ -0.33
CIRBP-228ENST00000590347 C2CD4DB7Z1M9 353 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 ZNF814B7Z6K7 855 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 RELBQ01201 579 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 SHISA6Q6ZSJ9 500 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 Q6ZSR6 202 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 OR13H1Q8NG92 308 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 HOXB13Q92826 284 aaPredicted RBP13.01□□□□□ -0.33
CIRBP-228ENST00000590347 ZNF442Q9H7R0 627 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 PXMP4Q9Y6I8 212 aa13.01□□□□□ -0.33
CIRBP-228ENST00000590347 ASXL3Q9C0F0 2248 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 IGKV1D-13A0A0B4J2D9 117 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 NAPSAO96009 420 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 PPYP01298 95 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 IGKV1-13P0DP09 117 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 ASPHD1Q5U4P2 390 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 KCNIP4Q6PIL6 250 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 ZDHHC19Q8WVZ1 309 aaPredicted RBP13□□□□□ -0.33
CIRBP-228ENST00000590347 WDYHV1Q96HA8 205 aa13□□□□□ -0.33
CIRBP-228ENST00000590347 TMEM222Q9H0R3 208 aa13□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms