RNA–Protein interactions for RNA: ENST00000589318.5

DDX39A-209, Transcript of DExD-box helicase 39A, human

TSL 1 (best)

Gene DDX39A, Length 1,903 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
DDX39A-209	ENST00000589318	HSF4	Q9ULV5	492 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	ST3GAL6	Q9Y274	331 aa		13.07	□□□□□ -0.32
DDX39A-209	ENST00000589318	CEACAM18	A8MTB9	384 aa		13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	CA11	O75493	328 aa		13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	ADAP1	O75689	374 aa		13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	PTBP3	O95758	552 aa	Known RBP	13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	KITLG	P21583	273 aa		13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	MBNL2	Q5VZF2	373 aa	Known RBP	13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	ZNF573	Q86YE8	665 aa		13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR10AD1	Q8NGE0	317 aa		13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	RND1	Q92730	232 aa		13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	RHOV	Q96L33	236 aa		13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	STRAP	Q9Y3F4	350 aa	Known RBP	13.06	□□□□□ -0.32
DDX39A-209	ENST00000589318	MLNR	O43193	412 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	SFT2D2	O95562	160 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	PLA2G5	P39877	138 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	RPS10	P46783	165 aa	Known RBP	13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	NDUFA6	P56556	154 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	LY6D	Q14210	128 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	CLINT1	Q14677	625 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	ARL6IP1	Q15041	203 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	ALKBH2	Q6NS38	261 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	PCSK4	Q6UW60	755 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	HOGA1	Q86XE5	327 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	MKX	Q8IYA7	352 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR8G5	Q8NG78	346 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR10D4P	Q8NGN7	298 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM122A	Q96E09	287 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	SIRT7	Q9NRC8	400 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	PLEKHJ1	Q9NW61	149 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	FZR1	Q9UM11	496 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	PKD1L2	Q7Z442	2459 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	TRGV8	A0A0C4DH27	118 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	MSGN1	A6NI15	193 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318		H0YL77	283 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	C16orf97	H3BN30	126 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR8U9	P0C7N5	309 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	SEC11B	P0C7V7	166 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	AKR1C4	P17516	323 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	CA7	P43166	264 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	FABP6	P51161	128 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	FGF12	P61328	243 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	NKX6-1	P78426	367 aa	Predicted RBP	13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	NHLH2	Q02577	135 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	IL24	Q13007	206 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	ARFRP1	Q13795	201 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	ZNF718	Q3SXZ3	478 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	RPL7L1	Q6DKI1	246 aa	Known RBP	13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318		Q6ZR03	302 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	C1orf174	Q8IYL3	243 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR8U1	Q8NH10	309 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	EMG1	Q92979	244 aa	Known RBP	13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	MRGPRF	Q96AM1	343 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	POM121	Q96HA1	1249 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	RTL8A	Q9BWD3	113 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	PKIB	Q9C010	78 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	IL36RN	Q9UBH0	155 aa		13.05	□□□□□ -0.32
DDX39A-209	ENST00000589318	ADGRG4	Q8IZF6	3080 aa		13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	AGPAT2	O15120	278 aa		13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	RHBDL1	O75783	438 aa		13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	HRH1	P35367	487 aa		13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	NUTF2	P61970	127 aa	Known RBP	13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	PDCD1	Q15116	288 aa		13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	SLC22A25	Q6T423	547 aa		13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	TERB2	Q8NHR7	220 aa		13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	ZNF488	Q96MN9	340 aa		13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	HDHD3	Q9BSH5	251 aa	Predicted RBP	13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAAP24	Q9BTP7	215 aa		13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	RELN	P78509	3460 aa		13.04	□□□□□ -0.32
DDX39A-209	ENST00000589318	LRP5L	A4QPB2	252 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318		J3QT63	122 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	CRYAA	P02489	173 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	RPS23	P62266	143 aa	Known RBP	13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	ZNF154	Q13106	437 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	TMEM211	Q6ICI0	200 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	HIST3H2BB	Q8N257	126 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	SCRT1	Q9BWW7	348 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	CNTNAP3	Q9BZ76	1288 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	MRPL37	Q9BZE1	423 aa	Known RBP	13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	ARV1	Q9H2C2	271 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	OR5AC2	Q9NZP5	309 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	AK3	Q9UIJ7	227 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	TMEM8B	A6NDV4	472 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A10P	A6NDY2	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A18P	A6NE21	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A16P	A6NEW6	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A20P	A6NIJ5	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A8P	A6NJQ4	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A7P	A6NKC0	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A22P	A8MWA6	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A12P	A8MX19	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A5P	A8MXJ8	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A23P	A8MXZ1	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	C3orf80	F5H4A9	247 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	TRAPPC2L	H3BP13	241 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318		H7C1Q1	480 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	PDCD6	O75340	191 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	THBD	P07204	575 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A15P	P0C7V4	464 aa		13.03	□□□□□ -0.32
DDX39A-209	ENST00000589318	FAM90A13P	P0C7W8	464 aa		13.03	□□□□□ -0.32

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms