RNA–Protein interactions for RNA: ENST00000589239.5

RFX1-205, Transcript of regulatory factor X1, humanhuman

TSL 2

Gene RFX1, Length 2,122 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX1-205ENST00000589239 PCP4L1A6NKN8 68 aa20.52■□□□□ 0.88
RFX1-205ENST00000589239 H7C1Q1 480 aa20.52■□□□□ 0.88
RFX1-205ENST00000589239 ECDO95905 644 aaPredicted RBP20.52■□□□□ 0.88
RFX1-205ENST00000589239 CSF1P09603 554 aa20.52■□□□□ 0.88
RFX1-205ENST00000589239 FAAP20Q6NZ36 180 aa20.52■□□□□ 0.88
RFX1-205ENST00000589239 DCTN5Q9BTE1 182 aa20.52■□□□□ 0.88
RFX1-205ENST00000589239 HRASLSQ9HDD0 168 aa20.52■□□□□ 0.88
RFX1-205ENST00000589239 BEX4Q9NWD9 120 aaPredicted RBP20.52■□□□□ 0.88
RFX1-205ENST00000589239 ITPR2Q14571 2701 aa20.52■□□□□ 0.88
RFX1-205ENST00000589239 TRBV6-6A0A0A6YYG2 114 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 OR2A4O95047 310 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 S100A11P31949 105 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 FLI1Q01543 452 aaPredicted RBP20.51■□□□□ 0.87
RFX1-205ENST00000589239 ZNF880Q6PDB4 577 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 GLDNQ6ZMI3 551 aaPredicted RBP20.51■□□□□ 0.87
RFX1-205ENST00000589239 STPG2Q8N412 459 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 C10orf105Q8TEF2 133 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 OR2A7Q96R45 310 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 MIOXQ9UGB7 285 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 ODAMA1E959 279 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 ZNF736B4DX44 427 aaPredicted RBP20.51■□□□□ 0.87
RFX1-205ENST00000589239 NUPL2O15504 423 aaKnown RBP20.51■□□□□ 0.87
RFX1-205ENST00000589239 TAS2R19P59542 299 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 SEC61A1P61619 476 aaKnown RBP20.51■□□□□ 0.87
RFX1-205ENST00000589239 ZNF841Q6ZN19 808 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 TMEM229BQ8NBD8 167 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 CLRN3Q8NCR9 226 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 OR4D10Q8NGI6 311 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 PIMREGQ9BSJ6 248 aa20.51■□□□□ 0.87
RFX1-205ENST00000589239 WNT2P09544 360 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 AP3S2P59780 193 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 KIAA2026Q5HYC2 2103 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 ZNF286AQ9HBT8 521 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 MBNL3Q9NUK0 354 aaKnown RBP20.5■□□□□ 0.87
RFX1-205ENST00000589239 HRH1P35367 487 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 ALKAL2Q6UX46 152 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 OR8B3Q8NGG8 313 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 OR13A1Q8NGR1 328 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 MRGPRDQ8TDS7 321 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 NEIL1Q96FI4 390 aaPredicted RBP20.5■□□□□ 0.87
RFX1-205ENST00000589239 OR8B2Q96RD0 313 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 PATZ1Q9HBE1 687 aaKnown RBP20.5■□□□□ 0.87
RFX1-205ENST00000589239 ANXA10Q9UJ72 324 aa20.5■□□□□ 0.87
RFX1-205ENST00000589239 IGHV4-30-2A0A087WSY4 118 aa20.49■□□□□ 0.87
RFX1-205ENST00000589239 HMSDA8MTL9 139 aa20.49■□□□□ 0.87
RFX1-205ENST00000589239 M0QYG6 137 aa20.49■□□□□ 0.87
RFX1-205ENST00000589239 NDUFS8O00217 210 aa20.49■□□□□ 0.87
RFX1-205ENST00000589239 PMP2P02689 132 aa20.49■□□□□ 0.87
RFX1-205ENST00000589239 STEAP1BQ6NZ63 245 aa20.49■□□□□ 0.87
RFX1-205ENST00000589239 LURAP1Q96LR2 239 aa20.49■□□□□ 0.87
RFX1-205ENST00000589239 TINAGL1Q9GZM7 467 aaPredicted RBP20.49■□□□□ 0.87
RFX1-205ENST00000589239 ZNF107Q9UII5 783 aaPredicted RBP20.49■□□□□ 0.87
RFX1-205ENST00000589239 ARPC1BO15143 372 aaKnown RBP20.48■□□□□ 0.87
RFX1-205ENST00000589239 OR4C16Q8NGL9 310 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 H1FXQ92522 213 aaKnown RBP20.48■□□□□ 0.87
RFX1-205ENST00000589239 SEC22CQ9BRL7 303 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 GPN1Q9HCN4 374 aaPredicted RBP20.48■□□□□ 0.87
RFX1-205ENST00000589239 DNASE2O00115 360 aaPredicted RBP20.48■□□□□ 0.87
RFX1-205ENST00000589239 CREBL2O60519 120 aaPredicted RBP20.48■□□□□ 0.87
RFX1-205ENST00000589239 SCTP09683 121 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 GLP1RP43220 463 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 SRSF7Q16629 238 aaKnown RBP eCLIP20.48■□□□□ 0.87
RFX1-205ENST00000589239 CHRFAM7AQ494W8 412 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 TMUB2Q71RG4 321 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 PDZD9Q8IXQ8 264 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 PRR18Q8N4B5 295 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 OR1S1Q8NH92 325 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 UBALD1Q8TB05 177 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 C19orf12Q9NSK7 152 aa20.48■□□□□ 0.87
RFX1-205ENST00000589239 POM121CA8CG34 1229 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 SNRPGP15A8MWD9 76 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 IL5P05113 134 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 AKAIN1P0CW23 69 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 CLEC12BQ2HXU8 276 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 ZNF626Q68DY1 528 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 Q6ZS49 121 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 MOB1BQ7L9L4 216 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 OR5AP2Q8NGF4 316 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 CLN8Q9UBY8 286 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 ZNF69Q9UC07 566 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 MALRD1Q5VYJ5 2156 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 VWC2LB2RUY7 222 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 TRDCB7Z8K6 153 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 RAB3DO95716 219 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 CD74P04233 296 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 MBD6Q96DN6 1003 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 TAF9BQ9HBM6 251 aa20.47■□□□□ 0.87
RFX1-205ENST00000589239 MPTX1A8MV57 137 aa20.46■□□□□ 0.87
RFX1-205ENST00000589239 SSTR5P35346 364 aa20.46■□□□□ 0.87
RFX1-205ENST00000589239 MECP2P51608 486 aaKnown RBP20.46■□□□□ 0.87
RFX1-205ENST00000589239 RPL31P62899 125 aaKnown RBP20.46■□□□□ 0.87
RFX1-205ENST00000589239 HLA-DRB3P79483 266 aa20.46■□□□□ 0.87
RFX1-205ENST00000589239 IGSF11Q5DX21 431 aa20.46■□□□□ 0.87
RFX1-205ENST00000589239 WDR25Q64LD2 544 aaPredicted RBP20.46■□□□□ 0.87
RFX1-205ENST00000589239 TCF23Q7RTU1 214 aa20.46■□□□□ 0.87
RFX1-205ENST00000589239 LRRC75A-AS1Q8N1F1 130 aa20.46■□□□□ 0.87
RFX1-205ENST00000589239 CLDND2Q8NHS1 167 aa20.46■□□□□ 0.87
RFX1-205ENST00000589239 KIR2DS1A0A191URI9 304 aa20.45■□□□□ 0.86
RFX1-205ENST00000589239 F5H0A9 414 aaPredicted RBP20.45■□□□□ 0.86
RFX1-205ENST00000589239 SDCBPO00560 298 aaPredicted RBP20.45■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms