RNA–Protein interactions for RNA: ENST00000588857.5

ATG4D-209, Transcript of autophagy related 4D cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4D, Length 1,555 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4D-209ENST00000588857 CLN8Q9UBY8 286 aa18.41■□□□□ 0.54
ATG4D-209ENST00000588857 IL5P05113 134 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 CGB3P0DN86 165 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 CGB7P0DN87 165 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 VSIG10L2P0DP72 767 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 PI3P19957 117 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 UCP3P55916 312 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 CBX3Q13185 183 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 LPCAT3Q6P1A2 487 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 ZNF841Q6ZN19 808 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 TCF23Q7RTU1 214 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 SLC25A42Q86VD7 318 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 FAM185AQ8N0U4 392 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 OR52L2PQ8NGH6 319 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 GAL3ST2Q9H3Q3 398 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 C5orf66Q9H5L9 145 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 PATZ1Q9HBE1 687 aaKnown RBP18.4■□□□□ 0.54
ATG4D-209ENST00000588857 TAS2R3Q9NYW6 316 aa18.4■□□□□ 0.54
ATG4D-209ENST00000588857 MYO9AB2RTY4 2548 aa18.39■□□□□ 0.54
ATG4D-209ENST00000588857 ANKRD17O75179 2603 aaKnown RBP18.39■□□□□ 0.54
ATG4D-209ENST00000588857 TRBV23-1A0A0A0MS06 115 aa18.39■□□□□ 0.53
ATG4D-209ENST00000588857 C7orf66A4D0T2 115 aa18.39■□□□□ 0.53
ATG4D-209ENST00000588857 AKR1C4P17516 323 aa18.39■□□□□ 0.53
ATG4D-209ENST00000588857 LTC4SQ16873 150 aa18.39■□□□□ 0.53
ATG4D-209ENST00000588857 TMEM200BQ69YZ2 307 aa18.39■□□□□ 0.53
ATG4D-209ENST00000588857 SLC38A6Q8IZM9 456 aa18.39■□□□□ 0.53
ATG4D-209ENST00000588857 SEC22CQ9BRL7 303 aa18.39■□□□□ 0.53
ATG4D-209ENST00000588857 F2RL2O00254 374 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 CTSDP07339 412 aaPredicted RBP18.38■□□□□ 0.53
ATG4D-209ENST00000588857 OR4E1P0C645 316 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 PAX1P15863 534 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 C17orf58Q2M2W7 97 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 ABCA11PQ4W5N1 156 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 ADAD2Q8NCV1 583 aaKnown RBP18.38■□□□□ 0.53
ATG4D-209ENST00000588857 SECTM1Q8WVN6 248 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 CAPSLQ8WWF8 208 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 PERPQ96FX8 193 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 RTBDNQ9BSG5 229 aaPredicted RBP18.38■□□□□ 0.53
ATG4D-209ENST00000588857 OR51J1Q9H342 316 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 GHITMQ9H3K2 345 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 RBM7Q9Y580 266 aaKnown RBP18.38■□□□□ 0.53
ATG4D-209ENST00000588857 MALRD1Q5VYJ5 2156 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 LUMP51884 338 aaPredicted RBP18.38■□□□□ 0.53
ATG4D-209ENST00000588857 GNB2P62879 340 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 ZNF273Q14593 569 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 GNMTQ14749 295 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 WDR25Q64LD2 544 aaPredicted RBP18.38■□□□□ 0.53
ATG4D-209ENST00000588857 FAHD2BQ6P2I3 314 aaPredicted RBP18.38■□□□□ 0.53
ATG4D-209ENST00000588857 CLEC2AQ6UVW9 174 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 FAM168AQ92567 244 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 FAHD2AQ96GK7 314 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 ZNF714Q96N38 554 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 SLC5A7Q9GZV3 580 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 GNG12Q9UBI6 72 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 JPT1Q9UK76 154 aa18.38■□□□□ 0.53
ATG4D-209ENST00000588857 IGHV3-43A0A0B4J1X8 118 aa18.37■□□□□ 0.53
ATG4D-209ENST00000588857 CREBL2O60519 120 aaPredicted RBP18.37■□□□□ 0.53
ATG4D-209ENST00000588857 IGHV3-43DP0DP04 118 aa18.37■□□□□ 0.53
ATG4D-209ENST00000588857 OMGP23515 440 aa18.37■□□□□ 0.53
ATG4D-209ENST00000588857 PPP1CCP36873 323 aaKnown RBP18.37■□□□□ 0.53
ATG4D-209ENST00000588857 UBE2MP61081 183 aaKnown RBP18.37■□□□□ 0.53
ATG4D-209ENST00000588857 OR10V1Q8NGI7 309 aa18.37■□□□□ 0.53
ATG4D-209ENST00000588857 PIMREGQ9BSJ6 248 aa18.37■□□□□ 0.53
ATG4D-209ENST00000588857 RSRP1Q9BUV0 290 aa18.37■□□□□ 0.53
ATG4D-209ENST00000588857 GSX2Q9BZM3 304 aa18.37■□□□□ 0.53
ATG4D-209ENST00000588857 BPESC1Q9GZL8 116 aa18.37■□□□□ 0.53
ATG4D-209ENST00000588857 TOLLIPQ9H0E2 274 aa18.37■□□□□ 0.53
ATG4D-209ENST00000588857 LINC00574Q9H8X3 128 aa18.37■□□□□ 0.53
ATG4D-209ENST00000588857 IGKV1D-13A0A0B4J2D9 117 aa18.36■□□□□ 0.53
ATG4D-209ENST00000588857 SNRPGP15A8MWD9 76 aa18.36■□□□□ 0.53
ATG4D-209ENST00000588857 F5H0A9 414 aaPredicted RBP18.36■□□□□ 0.53
ATG4D-209ENST00000588857 NDUFS8O00217 210 aa18.36■□□□□ 0.53
ATG4D-209ENST00000588857 PFDN1O60925 122 aa18.36■□□□□ 0.53
ATG4D-209ENST00000588857 IGKV1-13P0DP09 117 aa18.36■□□□□ 0.53
ATG4D-209ENST00000588857 TMEM30BQ3MIR4 351 aa18.36■□□□□ 0.53
ATG4D-209ENST00000588857 TMEM128Q5BJH2 165 aa18.36■□□□□ 0.53
ATG4D-209ENST00000588857 ZNF486Q96H40 463 aaPredicted RBP18.36■□□□□ 0.53
ATG4D-209ENST00000588857 IDI2-AS1Q9NZ38 188 aa18.36■□□□□ 0.53
ATG4D-209ENST00000588857 CCDC168Q8NDH2 2452 aa18.35■□□□□ 0.53
ATG4D-209ENST00000588857 SSNA1O43805 119 aa18.35■□□□□ 0.53
ATG4D-209ENST00000588857 RGS11O94810 467 aa18.35■□□□□ 0.53
ATG4D-209ENST00000588857 HLA-AP01891 365 aaKnown RBP18.35■□□□□ 0.53
ATG4D-209ENST00000588857 VAMP1P23763 118 aa18.35■□□□□ 0.53
ATG4D-209ENST00000588857 LOXL3P58215 753 aa18.35■□□□□ 0.53
ATG4D-209ENST00000588857 ESCO2Q56NI9 601 aa18.35■□□□□ 0.53
ATG4D-209ENST00000588857 ZNF626Q68DY1 528 aa18.35■□□□□ 0.53
ATG4D-209ENST00000588857 OR52B4Q8NGK2 314 aa18.35■□□□□ 0.53
ATG4D-209ENST00000588857 SSBP3Q9BWW4 388 aaPredicted RBP18.35■□□□□ 0.53
ATG4D-209ENST00000588857 MED28Q9H204 178 aa18.35■□□□□ 0.53
ATG4D-209ENST00000588857 A0A1W2PPH5 198 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 OR8U9P0C7N5 309 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 CCL3L1P16619 93 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 GNRHRP30968 328 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 PIGPP57054 158 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 PPP1R1AQ13522 171 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 FAM53AQ6NSI3 398 aaPredicted RBP18.34■□□□□ 0.53
ATG4D-209ENST00000588857 CCDC71LQ8N9Z2 235 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 OR10A7Q8NGE5 316 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 OR8U1Q8NH10 309 aa18.34■□□□□ 0.53
ATG4D-209ENST00000588857 ZNF431Q8TF32 576 aaPredicted RBP18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms