RNA–Protein interactions for RNA: ENST00000585847.5

VMP1-202, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 545 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-202ENST00000585847 F5H0A9 414 aaPredicted RBP10.47□□□□□ -0.73
VMP1-202ENST00000585847 HSPB6O14558 160 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 ITGB1BP1O14713 200 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 NDUFB3O43676 98 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 PPYP01298 95 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 WNT2P09544 360 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 LMO4P61968 165 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 PDCD1Q15116 288 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 AADACL3Q5VUY0 350 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 ZNF626Q68DY1 528 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 FAAP20Q6NZ36 180 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 LYPD2Q6UXB3 125 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 AKAP14Q86UN6 197 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 CMTM1Q8IZ96 169 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 ZBTB34Q8NCN2 500 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 MAPK1IP1LQ8NDC0 245 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 DEFB108BQ8NET1 73 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 DYRK2Q92630 601 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 CORO2AQ92828 525 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 AKR1E2Q96JD6 320 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 OR51J1Q9H342 316 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 TAF9BQ9HBM6 251 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 ING3Q9NXR8 418 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 ZNF581Q9P0T4 197 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 SHPKQ9UHJ6 478 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 KIF25Q9UIL4 384 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 GPR132Q9UNW8 380 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 LINC00312Q9Y6C7 94 aa10.47□□□□□ -0.73
VMP1-202ENST00000585847 A0A1B0GW55 424 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 ZNF729A6NN14 1252 aaPredicted RBP10.46□□□□□ -0.73
VMP1-202ENST00000585847 TMPRSS2O15393 492 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 LY6G6DO95868 133 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 RBP4P02753 201 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 OR4E1P0C645 316 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 GSTT2P0CG29 244 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 DUX4L2P0CJ85 424 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 DUX4L3P0CJ86 424 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 DUX4L4P0CJ87 422 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 DUX4L5P0CJ88 424 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 DUX4L6P0CJ89 424 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 DUX4L7P0CJ90 424 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 ZNF728P0DKX0 622 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 FCGR2CP31995 323 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 GMFBP60983 142 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 RND3P61587 244 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 RRAS2P62070 204 aaPredicted RBP10.46□□□□□ -0.73
VMP1-202ENST00000585847 LOXL1Q08397 574 aaPredicted RBP10.46□□□□□ -0.73
VMP1-202ENST00000585847 C4orf46Q504U0 113 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 BRICD5Q6PL45 260 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 DUX4L9Q6RFH8 374 aaPredicted RBP10.46□□□□□ -0.73
VMP1-202ENST00000585847 KCTD9Q7L273 389 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 RTN4RL2Q86UN3 420 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 CADM3Q8N126 398 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 OR52M1Q8NGK5 317 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 ZNF431Q8TF32 576 aaPredicted RBP10.46□□□□□ -0.73
VMP1-202ENST00000585847 COQ2Q96H96 371 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 MED28Q9H204 178 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 NARFLQ9H6Q4 476 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 CTSZQ9UBR2 303 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 DUX4Q9UBX2 424 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 SLC25A10Q9UBX3 287 aaPredicted RBP10.46□□□□□ -0.73
VMP1-202ENST00000585847 ZNF69Q9UC07 566 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 MIOXQ9UGB7 285 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 OR2W1Q9Y3N9 320 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 MAB21L2Q9Y586 359 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 ALG5Q9Y673 324 aa10.46□□□□□ -0.73
VMP1-202ENST00000585847 hCG_2014768A0A024R1R8 64 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 IGKV1D-8A0A087WSZ0 117 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 A0A1B0GVG6 124 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 F2RL2O00254 374 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 HSPA12AO43301 675 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 DUS4LO95620 317 aaKnown RBP10.45□□□□□ -0.74
VMP1-202ENST00000585847 IGHV2-5P01817 119 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 GYPAP02724 150 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 PGAM2P15259 253 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 USF1P22415 310 aaPredicted RBP10.45□□□□□ -0.74
VMP1-202ENST00000585847 KRTAP1-1Q07627 177 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 AESQ08117 197 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 ABCA11PQ4W5N1 156 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 ZNF841Q6ZN19 808 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 H1FOOQ8IZA3 346 aaPredicted RBP10.45□□□□□ -0.74
VMP1-202ENST00000585847 TCTEX1D1Q8N7M0 179 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 OR5T2Q8NGG2 359 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 MAFIPQ8WZ33 124 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 DACT3Q96B18 629 aaPredicted RBP10.45□□□□□ -0.74
VMP1-202ENST00000585847 GALNT14Q96FL9 552 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 C1orf159Q96HA4 380 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 PHB2Q99623 299 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 PATZ1Q9HBE1 687 aaKnown RBP10.45□□□□□ -0.74
VMP1-202ENST00000585847 METRNQ9UJH8 293 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 KCNIP3Q9Y2W7 256 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 MALRD1Q5VYJ5 2156 aa10.45□□□□□ -0.74
VMP1-202ENST00000585847 JMJD1CQ15652 2540 aa10.44□□□□□ -0.74
VMP1-202ENST00000585847 A0A0A6YYJ9 748 aa10.44□□□□□ -0.74
VMP1-202ENST00000585847 A0A0B4J293 547 aa10.44□□□□□ -0.74
VMP1-202ENST00000585847 hCG_1809904A0A1W2PP81 198 aa10.44□□□□□ -0.74
VMP1-202ENST00000585847 A0A1W2PPE2 198 aa10.44□□□□□ -0.74
VMP1-202ENST00000585847 A0A1W2PR64 198 aa10.44□□□□□ -0.74
VMP1-202ENST00000585847 A0A1W2PRV1 198 aa10.44□□□□□ -0.74
VMP1-202ENST00000585847 RNF212BA8MTL3 300 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms