RNA–Protein interactions for RNA: ENST00000578063.5

PRKCA-203, Transcript of protein kinase C alpha, humanhuman

TSL 1 (best)

Gene PRKCA, Length 1,733 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCA-203ENST00000578063 PHB2Q99623 299 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 CCL19Q99731 98 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 OR2S2Q9NQN1 319 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 JPT1Q9UK76 154 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 UBE2J1Q9Y385 318 aaPredicted RBP15.37■□□□□ 0.05
PRKCA-203ENST00000578063 LRBAP50851 2863 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 KBTBD11-OT1A0A1B0GTJ5 212 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 CRYM-AS1A6NIL9 109 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 ZNF729A6NN14 1252 aaPredicted RBP15.37■□□□□ 0.05
PRKCA-203ENST00000578063 GPR31O00270 319 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 RPS2P15880 293 aaKnown RBP15.37■□□□□ 0.05
PRKCA-203ENST00000578063 CD34P28906 385 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 GNRHRP30968 328 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 RPL31P62899 125 aaKnown RBP15.37■□□□□ 0.05
PRKCA-203ENST00000578063 CD83Q01151 205 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 TMEM30BQ3MIR4 351 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 TCF23Q7RTU1 214 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 OR2AK2Q8NG84 335 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 OR52L2PQ8NGH6 319 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 RFESDQ8TAC1 157 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 CLN8Q9UBY8 286 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 MIOXQ9UGB7 285 aa15.37■□□□□ 0.05
PRKCA-203ENST00000578063 MEX3AA1L020 520 aaKnown RBP15.36■□□□□ 0.05
PRKCA-203ENST00000578063 A8MV72 311 aaPredicted RBP15.36■□□□□ 0.05
PRKCA-203ENST00000578063 RND3P61587 244 aa15.36■□□□□ 0.05
PRKCA-203ENST00000578063 SUPT4H1P63272 117 aaKnown RBP15.36■□□□□ 0.05
PRKCA-203ENST00000578063 C17orf58Q2M2W7 97 aa15.36■□□□□ 0.05
PRKCA-203ENST00000578063 NLRC3Q7RTR2 1065 aa15.36■□□□□ 0.05
PRKCA-203ENST00000578063 FGFRL1Q8N441 504 aa15.36■□□□□ 0.05
PRKCA-203ENST00000578063 CASTOR1Q8WTX7 329 aa15.36■□□□□ 0.05
PRKCA-203ENST00000578063 FAM216AQ8WUB2 273 aa15.36■□□□□ 0.05
PRKCA-203ENST00000578063 RTN4IP1Q8WWV3 396 aaPredicted RBP15.36■□□□□ 0.05
PRKCA-203ENST00000578063 LINC00574Q9H8X3 128 aa15.36■□□□□ 0.05
PRKCA-203ENST00000578063 TAS2R3Q9NYW6 316 aa15.36■□□□□ 0.05
PRKCA-203ENST00000578063 MGAT4CQ9UBM8 478 aa15.36■□□□□ 0.05
PRKCA-203ENST00000578063 TEX13DA0A0J9YY54 714 aaPredicted RBP15.35■□□□□ 0.05
PRKCA-203ENST00000578063 GPR37O15354 613 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 FCN3O75636 299 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 ANXA3P12429 323 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 CXCL3P19876 107 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 S100GP29377 79 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 GNMTQ14749 295 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 PHLDA2Q53GA4 152 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 CMTM1Q8IZ96 169 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 UXS1Q8NBZ7 420 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 COQ8AQ8NI60 647 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 GAL3ST2Q9H3Q3 398 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 NAA60Q9H7X0 242 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 RANGRFQ9HD47 186 aaPredicted RBP15.35■□□□□ 0.05
PRKCA-203ENST00000578063 C19orf12Q9NSK7 152 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 GNG12Q9UBI6 72 aa15.35■□□□□ 0.05
PRKCA-203ENST00000578063 RBM7Q9Y580 266 aaKnown RBP15.35■□□□□ 0.05
PRKCA-203ENST00000578063 TRBV23-1A0A0A0MS06 115 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 A0A0B4J2A0 478 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 NDUFS7O75251 213 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 IFNA2P01563 188 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 GPR6P46095 362 aaPredicted RBP15.34■□□□□ 0.05
PRKCA-203ENST00000578063 ZNF818PQ6ZRF7 136 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 TCTE3Q8IZS6 198 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 OR8B3Q8NGG8 313 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 EDARADDQ8WWZ3 215 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 H1FXQ92522 213 aaKnown RBP15.34■□□□□ 0.05
PRKCA-203ENST00000578063 GALNT14Q96FL9 552 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 OR8B2Q96RD0 313 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 CCL28Q9NRJ3 127 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 SHPKQ9UHJ6 478 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 KCNIP3Q9Y2W7 256 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 UTP20O75691 2785 aaKnown RBP15.34■□□□□ 0.05
PRKCA-203ENST00000578063 BOLA2-SMG1P6H3BVE0 249 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 HSD17B6O14756 317 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 YPEL1O60688 119 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 RGS11O94810 467 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 PPP1CCP36873 323 aaKnown RBP15.34■□□□□ 0.05
PRKCA-203ENST00000578063 SLC9A3R2Q15599 337 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 NEIL1Q96FI4 390 aaPredicted RBP15.34■□□□□ 0.05
PRKCA-203ENST00000578063 AKR1E2Q96JD6 320 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 YPEL2Q96QA6 119 aa15.34■□□□□ 0.05
PRKCA-203ENST00000578063 PARP12Q9H0J9 701 aaKnown RBP15.34■□□□□ 0.05
PRKCA-203ENST00000578063 IGHV3-43A0A0B4J1X8 118 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 HAX1O00165 279 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 OR8U9P0C7N5 309 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 IGHV3-43DP0DP04 118 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 LOXL3P58215 753 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 LDLRAD3Q86YD5 345 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 BVESQ8NE79 360 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 OR10A7Q8NGE5 316 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 OR8U1Q8NH10 309 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 ZNF714Q96N38 554 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 FYTTD1Q96QD9 318 aaKnown RBP15.33■□□□□ 0.04
PRKCA-203ENST00000578063 ZNF436Q9C0F3 470 aaPredicted RBP15.33■□□□□ 0.04
PRKCA-203ENST00000578063 IDI2-AS1Q9NZ38 188 aa15.33■□□□□ 0.04
PRKCA-203ENST00000578063 GOSR2O14653 212 aa15.32■□□□□ 0.04
PRKCA-203ENST00000578063 MPPED1O15442 326 aa15.32■□□□□ 0.04
PRKCA-203ENST00000578063 SLC22A5O76082 557 aa15.32■□□□□ 0.04
PRKCA-203ENST00000578063 ZNF273Q14593 569 aa15.32■□□□□ 0.04
PRKCA-203ENST00000578063 MSMO1Q15800 293 aa15.32■□□□□ 0.04
PRKCA-203ENST00000578063 LTC4SQ16873 150 aa15.32■□□□□ 0.04
PRKCA-203ENST00000578063 ZNF841Q6ZN19 808 aa15.32■□□□□ 0.04
PRKCA-203ENST00000578063 OR52M1Q8NGK5 317 aa15.32■□□□□ 0.04
PRKCA-203ENST00000578063 SUCNR1Q9BXA5 334 aa15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms