RNA–Protein interactions for RNA: ENST00000577725.1

CRLF3-202, Transcript of cytokine receptor like factor 3, humanhuman

TSL 5

Gene CRLF3, Length 613 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRLF3-202ENST00000577725 ALG5Q9Y673 324 aa8.32□□□□□ -1.08
CRLF3-202ENST00000577725 YLPM1P49750 1951 aaKnown RBP8.31□□□□□ -1.08
CRLF3-202ENST00000577725 IGHV3-43A0A0B4J1X8 118 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 OR5H14A6NHG9 310 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 CEACAM18A8MTB9 384 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 HBZP02008 142 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 IGHV3-43DP0DP04 118 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 PI3P19957 117 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 FCGR2CP31995 323 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 MRPS11P82912 194 aaKnown RBP8.31□□□□□ -1.08
CRLF3-202ENST00000577725 GNMTQ14749 295 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 RBMS2Q15434 407 aaKnown RBP8.31□□□□□ -1.08
CRLF3-202ENST00000577725 Q6ZS49 121 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 TCF23Q7RTU1 214 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 SLC36A1Q7Z2H8 476 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 TMED4Q7Z7H5 227 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 PEG10Q86TG7 708 aaKnown RBP8.31□□□□□ -1.08
CRLF3-202ENST00000577725 ZNF525Q8N782 197 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 C3orf56Q8N813 242 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 OR52L2PQ8NGH6 319 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 DEDD2Q8WXF8 326 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 H1FXQ92522 213 aaKnown RBP8.31□□□□□ -1.08
CRLF3-202ENST00000577725 MED30Q96HR3 178 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 PRRT1Q99946 306 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 SEC22CQ9BRL7 303 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 MARVELD1Q9BSK0 173 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 PARP12Q9H0J9 701 aaKnown RBP8.31□□□□□ -1.08
CRLF3-202ENST00000577725 CHODLQ9H9P2 273 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 MBNL3Q9NUK0 354 aaKnown RBP8.31□□□□□ -1.08
CRLF3-202ENST00000577725 SLC2A8Q9NY64 477 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 KCNIP1Q9NZI2 227 aa8.31□□□□□ -1.08
CRLF3-202ENST00000577725 DOCK11Q5JSL3 2073 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 KIR2DS1A0A191URI9 304 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 DVL1O14640 695 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 NDUFB3O43676 98 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 RPS2P15880 293 aaKnown RBP8.3□□□□□ -1.08
CRLF3-202ENST00000577725 KIR2DS4P43632 304 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 GPR6P46095 362 aaPredicted RBP8.3□□□□□ -1.08
CRLF3-202ENST00000577725 ZNF273Q14593 569 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 KIR2DS1Q14954 304 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 SRSF7Q16629 238 aaKnown RBP eCLIP8.3□□□□□ -1.08
CRLF3-202ENST00000577725 TATDN3Q17R31 274 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 LRRC10Q5BKY1 277 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 C6orf183Q5T699 404 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 AADACL3Q5VUY0 350 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 ZNF660Q6AZW8 331 aaPredicted RBP8.3□□□□□ -1.08
CRLF3-202ENST00000577725 LHFPL1Q86WI0 220 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 TMEM17Q86X19 198 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 FAM185AQ8N0U4 392 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 CADM3Q8N126 398 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 ARRDC1Q8N5I2 433 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 ADAD2Q8NCV1 583 aaKnown RBP8.3□□□□□ -1.08
CRLF3-202ENST00000577725 OR10V1Q8NGI7 309 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 OR52B4Q8NGK2 314 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 OR5D13Q8NGL4 314 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 OR4A4PQ8NGN8 299 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 CAPSLQ8WWF8 208 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 GIMAP1Q8WWP7 306 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 RAB1CQ92928 201 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 TOMM40LQ969M1 308 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 ARL11Q969Q4 196 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 DACT3Q96B18 629 aaPredicted RBP8.3□□□□□ -1.08
CRLF3-202ENST00000577725 TIMD4Q96H15 378 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 CABLES2Q9BTV7 478 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 FAM234AQ9H0X4 552 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 DNTTIP1Q9H147 329 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 C19orf12Q9NSK7 152 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 COPZ2Q9P299 210 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 ZNF69Q9UC07 566 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 SLC23A1Q9UHI7 598 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 ARHGAP32A7KAX9 2087 aa8.3□□□□□ -1.08
CRLF3-202ENST00000577725 MALRD1Q5VYJ5 2156 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 ABCA1O95477 2261 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 PRKDCP78527 4128 aaKnown RBP8.29□□□□□ -1.08
CRLF3-202ENST00000577725 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.29□□□□□ -1.084e-11■■■■■ 41.7
CRLF3-202ENST00000577725 TENM1Q9UKZ4 2725 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 IGKV1D-13A0A0B4J2D9 117 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 C15orf65H3BRN8 121 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 IGKV1-13P0DP09 117 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 OMGP23515 440 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 IL2RGP31785 369 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 BCAP31P51572 246 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 HERV-K104P61576 105 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 KCNJ8Q15842 424 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 C17orf58Q2M2W7 97 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 UTF1Q5T230 341 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 PRAMEF5Q5TYX0 476 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 LDLRAD3Q86YD5 345 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 H1FOOQ8IZA3 346 aaPredicted RBP8.29□□□□□ -1.08
CRLF3-202ENST00000577725 MUC20Q8N307 709 aaPredicted RBP8.29□□□□□ -1.08
CRLF3-202ENST00000577725 LILRB2Q8N423 598 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 OR6F1Q8NGZ6 308 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 TERB2Q8NHR7 220 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 EAF1Q96JC9 268 aaPredicted RBP8.29□□□□□ -1.08
CRLF3-202ENST00000577725 CALYQ9NYX4 217 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 KAAG1Q9UBP8 84 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 MGAT4AQ9UM21 535 aa8.29□□□□□ -1.08
CRLF3-202ENST00000577725 TRBV6-7A0A0A0MS04 114 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 A0A0A6YYJ9 748 aa8.28□□□□□ -1.08
CRLF3-202ENST00000577725 FUOMA2VDF0 154 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms