RNA–Protein interactions for RNA: ENST00000576012.5

SCARF1-209, Transcript of scavenger receptor class F member 1, humanhuman

TSL 2

Gene SCARF1, Length 3,292 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-209ENST00000576012 KIAA1324LA8MWY0 1029 aaPredicted RBP12.44□□□□□ -0.42
SCARF1-209ENST00000576012 SMPD2O60906 423 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 SELEP16581 610 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 FASLGP48023 281 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 SLC23A3Q6PIS1 610 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 WDR5BQ86VZ2 330 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 OR2T10Q8NGZ9 312 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 OR2V1Q8NHB1 315 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 DIRC2Q96SL1 478 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 IMMP2LQ96T52 175 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 CDCA3Q99618 268 aaPredicted RBP12.44□□□□□ -0.42
SCARF1-209ENST00000576012 FSCN3Q9NQT6 498 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 MYOTQ9UBF9 498 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 NAT8Q9UHE5 227 aa12.44□□□□□ -0.42
SCARF1-209ENST00000576012 WDR1O75083 606 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 PDGFBP01127 241 aaPredicted RBP12.43□□□□□ -0.42
SCARF1-209ENST00000576012 COL8A2P25067 703 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 GPM6AP51674 278 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 TDGF1P3P51864 188 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 TGFBR3Q03167 851 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 IL24Q13007 206 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 LBHQ53QV2 105 aaPredicted RBP12.43□□□□□ -0.42
SCARF1-209ENST00000576012 NMSQ5H8A3 153 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 ANKRD37Q7Z713 158 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 Q8NFD4 153 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 ADGRG7Q96K78 797 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 AHCTF1Q8WYP5 2266 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 CD300LBA8K4G0 201 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 PAGE4O60829 102 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 CLDN1O95832 211 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 GCH1P30793 250 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 OR5I1Q13606 314 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 RPP25LQ8N5L8 163 aaKnown RBP12.43□□□□□ -0.42
SCARF1-209ENST00000576012 FAM103A1Q9BTL3 118 aaKnown RBP12.43□□□□□ -0.42
SCARF1-209ENST00000576012 A0A1W2PPC4 97 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 AQP7P3A6NL99 342 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 RBMXL2O75526 392 aaKnown RBP12.43□□□□□ -0.42
SCARF1-209ENST00000576012 RBM11P57052 281 aaKnown RBP12.43□□□□□ -0.42
SCARF1-209ENST00000576012 MEF2BQ02080 365 aaPredicted RBP12.43□□□□□ -0.42
SCARF1-209ENST00000576012 NABP1Q96AH0 204 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 DEFB126Q9BYW3 111 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 PARD6AQ9NPB6 346 aa12.43□□□□□ -0.42
SCARF1-209ENST00000576012 SPINK4O60575 86 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 PGLYRP1O75594 196 aaPredicted RBP12.42□□□□□ -0.42
SCARF1-209ENST00000576012 GCGP01275 180 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 OR3A1P47881 315 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 TMEM41BQ5BJD5 291 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 PNPLA5Q7Z6Z6 429 aaPredicted RBP12.42□□□□□ -0.42
SCARF1-209ENST00000576012 ADPRHL1Q8NDY3 354 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 SPSB1Q96BD6 273 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 CRIM1Q9NZV1 1036 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 RNF115Q9Y4L5 304 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 TRAPPC1Q9Y5R8 145 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 MTCH2Q9Y6C9 303 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 TCF21O43680 179 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 ERVFC1-1P60608 527 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 OR2M3Q8NG83 312 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 DERL1Q9BUN8 251 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 OPN3Q9H1Y3 402 aaPredicted RBP12.42□□□□□ -0.42
SCARF1-209ENST00000576012 GPR27Q9NS67 375 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 NAGKQ9UJ70 344 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 CHTOPQ9Y3Y2 248 aaKnown RBP12.42□□□□□ -0.42
SCARF1-209ENST00000576012 EML6Q6ZMW3 1958 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 TRAV34A0A0B4J273 112 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 IGKV1-6A0A0C4DH72 117 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 NPIPB13A6NJU9 1138 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 NPIPB4C9JG80 1138 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 HPRT1P00492 218 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 GYPAP02724 150 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 SRPXP78539 464 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 TRA2AQ13595 282 aaKnown RBP eCLIP12.42□□□□□ -0.42
SCARF1-209ENST00000576012 C20orf204Q6ZNR8 217 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 ZNF295-AS1Q8N0V1 137 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 VN1R17PQ8TDU5 208 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 OIT3Q8WWZ8 545 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 TMEM56Q96MV1 263 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 RNF150Q9ULK6 438 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 TMEM56-RWDD3S4R434 201 aa12.42□□□□□ -0.42
SCARF1-209ENST00000576012 ASPMQ8IZT6 3477 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 A0A096LPE4 126 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 A0A1W2PPZ6 126 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 TUSC2O75896 110 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 CD38P28907 300 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 CNN1P51911 297 aaKnown RBP12.41□□□□□ -0.42
SCARF1-209ENST00000576012 RAB4BP61018 213 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 HNRNPKP61978 463 aaKnown RBP eCLIP12.41□□□□□ -0.42
SCARF1-209ENST00000576012 BAXQ07812 192 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 ARSJQ5FYB0 599 aaPredicted RBP12.41□□□□□ -0.42
SCARF1-209ENST00000576012 MRGPRGQ86SM5 289 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 HAPLN4Q86UW8 402 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 MARCH11A6NNE9 402 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 B4E171 279 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 SYNGR2O43760 224 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 NTF4P34130 210 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 PTGDSP41222 190 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 THBS3P49746 956 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 BEND2Q8NDZ0 799 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 OR1A1Q9P1Q5 309 aa12.41□□□□□ -0.42
SCARF1-209ENST00000576012 IGHV1OR21-1A0A087WYE8 117 aa12.4□□□□□ -0.42
SCARF1-209ENST00000576012 CA11O75493 328 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms